Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8T1
Confidence99.69%DateThu Jan 5 11:08:40 GMT 2012
Rank104Aligned Residues126
% Identity16%Templatec3ofkA_
PDB info PDB header:transferaseChain: A: PDB Molecule:nodulation protein s; PDBTitle: crystal structure of n-methyltransferase nods from bradyrhizobium2 japonicum wm9 in complex with s-adenosyl-l-homocysteine (sah)
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   157..160.........170.........180.........190.........200.........210.........220.........230......
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  LTGKTVIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQPEEMKADVVVANILAGPL
Query Conservation       




 


 
 
 

  
   
 




  

  
  
   
                    
 




    
Alig confidence 























.























.





























Template Conservation      







 
     

   .  
  

 
   
  
        .                  
 
     
   
Template Sequence  GAVSNGLEIGCAAGAFTEKLAPHC. KRLTVIDVMPRAIGRACQRTKRWS. HISWAATDILQFSTAELFDLIVVAEVLYYL
Template Known Secondary structure  SS

TTSGGG.S
TTT
S.S

TTT


S

S
GGGS
Template Predicted Secondary structure 













.



.

















Template SS confidence 















































































   43......50.........60...... ...70.........80.........90 .........100.........110.........120
 
   237..240.........250......... 260.........270.........280....
Predicted Secondary structure  ......




.........








Query SS confidence  . . . . . .






















. . . . . . . . .
























Query Sequence  . . . . . . RELAPLISVLPVSGGLLGLSGIL. . . . . . . . . ASQAESVCEAYADSFALDPVVEKEE
Query Conservation  ......          




 

 


 .........      
      
           
Alig confidence  ......






















.........
























Template Conservation           
      




 
                               

      
Template Sequence  EDMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEALTEVERVQCQG
Template Known Secondary structure  SST
TT
S

S
Template Predicted Secondary structure 

























Template SS confidence 






























































   121........130.........140.........150.........160.........170.........180...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions