Job Description P0A8T1 Confidence 99.57% Date Thu Jan 5 11:08:40 GMT 2012 Rank 176 Aligned Residues 137 % Identity 16% Template c3mq2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methyltransferase; PDBTitle: crystal structure of 16s rrna methyltranferase kamb Resolution 1.69 Å

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.						.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																								.																										.	.	.	.	.
Query SS confidence																																								.																										.	.	.	.	.
Query Sequence		P	T	T	S	L	C	L	Q	W	L	D	S	L	D	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	K	L	G	.	A	A	K	A	I	G	I	D	I	D	P	Q	A	I	Q	A	S	R	D	N	A	E	R	N	G	.	.	.	.	.	V	S	D	R	L	E	L	Y	L	P	K
Query Conservation																																								.																										.	.	.	.	.
Alig confidence													.	.																										.																										.	.	.	.	.
Template Conservation													.	.
Template Sequence		E	F	S	D	A	E	F	E	Q	L	R	.	.	S	Q	Y	D	D	V	V	L	D	V	G	T	G	D	G	K	H	P	Y	K	V	A	R	Q	N	P	S	R	L	V	V	A	L	D	A	D	K	S	R	M	E	K	I	S	A	K	A	A	A	K	P	A	K	G	G	L	P	N	L	L	Y	L	W	A	T	A	E
Template Known Secondary structure													.	.	T	T	S	S							S		T	T												T	T								S		G	G	G	G								T	S		G	G	G	T			T	T								S	T
Template Predicted Secondary structure													.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.									.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.																			.	.	.	.	.	.	.	270
Predicted Secondary structure																							.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Q	P	E	E	M	K	A	D	V	V	V	A	N	I	L	A	G	P	L	R	.	.	.	.	.	.	.	.	E	L	A	P	L	I	S	V	L	P	V	S	G	G	L	L	G	L	S	G	I	L	A	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	S	V	C	E	A	Y
Query Conservation																							.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	P	P	L	S	G	V	G	E	L	H	V	L	M	P	W	G	S	L	L	R	G	V	L	G	S	S	P	E	M	L	R	G	M	A	A	V	C	R	P	G	A	S	F	L	V	A	L	N	L	H	A	W	R	P	S	V	P	E	V	G	E	H	P	E	P	T	P	D	S	A	D	E	W	L	A	P	R	Y
Template Known Secondary structure		T			S											S											T	S	S	S									T													G	G	G	B	T	T	B		G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		271	.		.	.	.	.	.	.	.	280	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		A	D	.	S	F	A	L	D	P	V	V	E
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		A	E	A	G	W	K	L	A	D	C	R	Y
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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