Job Description P0A8T1 Confidence 97.10% Date Thu Jan 5 11:08:40 GMT 2012 Rank 313 Aligned Residues 107 % Identity 18% Template c3lkzB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:non-structural protein 5; PDBTitle: structural and functional analyses of a conserved hydrophobic pocket2 of flavivirus methyltransferase Resolution 2.00 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190							.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.
Predicted Secondary structure																									.														.	.	.	.	.	.																													.	.
Query SS confidence																									.														.	.	.	.	.	.																													.	.
Query Sequence		L	D	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	.	K	L	G	A	A	K	A	I	G	I	D	I	D	.	.	.	.	.	.	P	Q	A	I	Q	A	S	R	D	N	A	E	R	N	G	V	S	D	R	L	E	L	Y	L	P	K	D	Q	.	.	P	E	E	M	K	A	D
Query Conservation																									.														.	.	.	.	.	.																													.	.
Alig confidence																									.														.	.	.	.	.	.				.	.	.	.	.	.	.	.																		.	.
Template Conservation																																																.	.	.	.	.	.	.	.
Template Sequence		F	L	E	P	V	G	K	V	I	D	L	G	C	G	R	G	G	W	C	Y	Y	M	A	T	Q	K	R	V	Q	E	V	R	G	Y	T	K	G	G	P	G	H	E	E	P	Q	L	.	.	.	.	.	.	.	.	V	Q	S	Y	G	W	N	I	V	T	M	K	S	G	V	D	V	F	Y	R	P	S	E	C	C	D
Template Known Secondary structure		S											T		T	T								T	T		T	T											S	T	T	S						.	.	.	.	.	.	.	.			B	T	T	G	G	G						S			T	T	S	S						S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.									.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		226	.	.	.	230	.	.	.											.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence										.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		V	V	V	A	N	I	L	A	.	.	.	.	.	.	.	.	.	.	G	P	L	R	E	L	A	P	L	I	S	V	L	P	V	S	G	.	G	L	L	G	L	S	G	I	L	A	S	Q	A	E	S	V	C	E	A	Y	A
Query Conservation										.	.	.	.	.	.	.	.	.	.																		.
Alig confidence										.	.	.	.	.	.	.	.	.	.					.													.						.
Template Conservation																								.																			.
Template Sequence		T	L	L	C	D	I	G	E	S	S	S	S	A	E	V	E	E	H	R	T	I	R	.	V	L	E	M	V	E	D	W	L	H	R	G	P	R	E	F	C	V	.	K	V	L	C	P	Y	M	P	K	V	I	E	K	M	E
Template Known Secondary structure												S												.										T	T								.			S		T	T	S
Template Predicted Secondary structure																								.																			.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions