Job Description P0A8T1 Confidence 98.94% Date Thu Jan 5 11:08:40 GMT 2012 Rank 269 Aligned Residues 147 % Identity 21% Template c3lkdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of the type i restriction-modification2 system methyltransferase subunit from streptococcus3 thermophilus, northeast structural genomics consortium4 target sur80 Resolution 2.25 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.																							.	.	.	.
Query SS confidence																					.	.	.	.	.	.																							.	.	.	.
Query Sequence		G	T	G	T	H	P	T	T	S	L	C	L	Q	W	L	D	S	L	D	.	.	.	.	.	.	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	K	.	.	.	.	L	G	A	A	K	A	I	G	I	D	I	D	P	Q	A	I	Q	A	S	R	D	N	A	E	R	N	G	V	S
Query Conservation																					.	.	.	.	.	.																							.	.	.	.
Alig confidence																					.	.	.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence		K	A	G	E	F	Y	T	P	Q	P	V	A	K	L	X	T	Q	I	A	F	L	G	R	E	D	K	Q	G	F	T	L	Y	D	A	T	X	G	S	G	S	L	L	L	N	A	K	R	Y	S	R	Q	P	Q	T	V	V	Y	F	G	Q	E	L	N	T	S	T	Y	N	L	A	R	X	N	X	I	L	H	G	V	P
Template Known Secondary structure			S	B																		T	T		T	T		S	S						T	T		T	T	S	T	T	G	G	G						S		G	G	G								S															T	T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		208		.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.																											.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.
Predicted Secondary structure			.													.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence			.													.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		D	.	R	L	E	L	Y	L	P	K	D	Q	P	E	.	.	.	.	.	.	E	M	K	A	D	V	V	V	A	N	I	L	A	G	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	L	A	P	L	I	S	V	L	P	V	S	.	G	G	L	L
Query Conservation			.													.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence			.													.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		I	E	N	Q	F	L	H	N	A	D	T	L	D	E	D	W	P	T	Q	E	P	T	N	F	D	G	V	L	X	N	P	P	Y	S	A	K	W	S	A	S	S	G	F	X	D	D	P	R	F	S	P	F	G	K	L	A	P	K	S	K	A	D	F	A	F	L	L	H	G	Y	Y	H	L	K	Q	D	N	G	V	X
Template Known Secondary structure		G	G	G						S		T	T	T	S		S			S	S				B	S								B	T							G	G	G	G	G	S	T	T	T	G	G	G	S	S				T	T													T	B		T	T	T
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		254	.				.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure				.	.	.					.	.
Query SS confidence				.	.	.					.	.
Query Sequence		G	L	.	.	.	S	G	I	L	.	.	A	S	Q	A	E	S	V	C	E	A	Y	A	D	S	F	A	L	D	P	V	V	E	K	E	E
Query Conservation				.	.	.					.	.
Alig confidence				.	.	.					.	.
Template Conservation
Template Sequence		A	I	V	L	P	H	G	V	L	F	R	G	N	A	E	G	T	I	R	K	A	L	L	E	E	G	A	I	D	T	V	I	G	L	P	A
Template Known Secondary structure							T																			T	T										S
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions