Job Description P0A8T1 Confidence 99.33% Date Thu Jan 5 11:08:40 GMT 2012 Rank 230 Aligned Residues 116 % Identity 28% Template c3lduA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative methylase; PDBTitle: the crystal structure of a possible methylase from2 clostridium difficile 630. Resolution 1.70 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	T	H	P	T	T	S	L	C	L	Q	W	L	D	S	L	D	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	K	L	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		A	P	I	R	E	T	L	A	A	G	L	I	Y	L	T	P	W	.	K	A	G	R	V	L	V	D	P	X	C	G	S	G	T	I	L	I	E	A	A	X	I	G	I	N	X	A	P	G	L	N	R	E	F	I	S	E	K	W	R	T	L	D	K	K	I	W	W	D	V	R	K	D	A	F	N	K	I	D	N	E
Template Known Secondary structure															T	S			.		T	T	S					T	T		T	T												T	T			T	T	T	T	S			G	G	G	G		T	T	S																S			S
Template Predicted Secondary structure																			.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
				182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.								.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																						.	.																		.	.	.	.	.	.	.														.	.
Query SS confidence		.	.																																						.	.																		.	.	.	.	.	.	.														.	.
Query Sequence		.	.	A	K	A	I	G	I	D	I	D	P	Q	A	I	Q	A	S	R	D	N	A	E	R	N	G	V	S	D	R	L	E	L	Y	L	P	K	D	Q	.	.	P	E	E	M	K	A	D	V	V	V	A	N	I	L	A	G	P	.	.	.	.	.	.	.	L	R	E	L	A	P	L	I	S	V	L	P	V	.	.
Query Conservation		.	.																																						.	.																		.	.	.	.	.	.	.														.	.
Alig confidence		.	.																																						.	.																		.	.	.	.	.	.	.														.	.
Template Conservation
Template Sequence		S	K	F	K	I	Y	G	Y	D	I	D	E	E	S	I	D	I	A	R	E	N	A	E	I	A	G	V	D	E	Y	I	E	F	N	V	G	D	A	T	Q	F	K	S	E	D	E	F	G	F	I	I	T	N	P	P	Y	G	E	R	L	E	D	K	D	S	V	K	Q	L	Y	K	E	L	G	Y	A	F	R	K	L
Template Known Secondary structure											S																T		G	G	G								G	G	G				S		B	S												S																				T	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		249	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	G	L	L	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	W	S	Y	Y	L
Template Known Secondary structure		B	S
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions