Job Description P0A8T1 Confidence 99.29% Date Thu Jan 5 11:08:40 GMT 2012 Rank 238 Aligned Residues 129 % Identity 14% Template c3gjyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of a probable spermidine synthase from2 corynebacterium glutamicum atcc 13032 Resolution 1.47 Å

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		142	.	.	.	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.																							.
Query SS confidence																.	.	.	.	.																							.
Query Sequence		H	P	T	T	S	L	C	L	Q	W	L	D	S	L	.	.	.	.	.	D	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	.	K	L	G	A	A	K	A	I	G	I	D	I	D	P	Q	A	I	Q	A	S	R	D	N	A	E	R	N	G	V	S	D	R	L	E	L	Y	L	P
Query Conservation																.	.	.	.	.																							.
Alig confidence																.	.	.	.	.																							.																													.
Template Conservation																																																																								.
Template Sequence		F	E	Y	X	R	W	I	A	T	G	A	R	A	F	I	D	A	H	Q	D	A	S	K	L	R	I	T	H	L	G	G	G	A	C	T	X	A	R	Y	F	A	D	V	Y	P	Q	S	R	N	T	V	V	E	L	D	A	E	L	A	R	L	S	R	E	W	F	D	I	P	R	.	A	P	R	V	K	I	R	V	D
Template Known Secondary structure		S																		S		G	G	G							S		G	G	G										S	T	T								S												S					.	T	T	T						S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.
		216	.						.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.								.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure				.	.	.	.	.																				.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.																				.	.	.	.	.	.	.
Query Sequence		K	D	.	.	.	.	.	Q	P	E	E	M	K	A	D	V	V	V	A	N	I	L	A	G	P	L	.	.	.	.	.	.	.	R	E	L	A	P	L	I	S	V	L	P	V	S	G	G	L	L	G	L	S	G	I	L	A	S	Q	A	E	S	V	C	E	A	Y	A
Query Conservation				.	.	.	.	.																				.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	R	X	V	A	E	S	F	T	P	A	S	R	D	V	I	I	R	D	V	F	A	G	A	I	T	P	Q	N	F	T	T	V	E	F	F	E	H	C	H	R	G	L	A	P	G	G	L	Y	V	A	N	C	G	D	H	S	D	L	R	G	A	K	S	E	L	A
Template Known Secondary structure									T			T	T										S	T	T	S				G	G	G	S	B																									T	T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions