Job Description P0A8T1 Confidence 99.82% Date Thu Jan 5 11:08:40 GMT 2012 Rank 32 Aligned Residues 171 % Identity 17% Template c3fzgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: structure of the 16s rrna methylase arma Resolution 2.00 Å

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		115	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.								.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.
Predicted Secondary structure									.																																			.	.	.	.	.	.	.																												.
Query SS confidence									.																																			.	.	.	.	.	.	.																												.
Query Sequence		C	P	S	W	R	D	V	.	P	D	E	N	A	V	N	V	M	L	D	P	G	L	A	F	G	T	G	T	H	P	T	T	S	L	C	L	Q	W	L	D	S	L	.	.	.	.	.	.	.	D	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	K	L	G	A	A	.	K	A	I
Query Conservation									.																																			.	.	.	.	.	.	.																												.
Alig confidence									.																	.	.	.	.															.	.	.	.	.	.	.																												.
Template Conservation																										.	.	.	.
Template Sequence		Y	P	N	W	D	K	L	L	K	K	Y	N	Q	G	Q	L	S	I	E	D	L	L	K	I	.	.	.	.	H	S	S	T	N	E	R	V	A	T	L	N	D	F	Y	T	Y	V	F	G	N	I	K	H	V	S	S	I	L	D	F	G	C	G	F	N	P	L	A	L	Y	Q	W	N	E	N	E	K	I	I	Y	H
Template Known Secondary structure														T	T	S										.	.	.	.	S					T	T	G	G	G												S				S						T		T	T										S	S
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.				.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.																			.	.	.	.	.	.
Query SS confidence																																																							.	.	.																			.	.	.	.	.	.
Query Sequence		G	I	D	I	D	P	Q	A	I	Q	A	S	R	D	N	A	E	R	N	G	V	S	D	R	L	E	L	Y	L	P	K	D	Q	P	E	E	M	K	A	D	V	V	V	A	N	I	L	A	G	P	L	R	E	.	.	.	L	A	P	L	I	S	V	L	P	V	S	G	G	L	L	G	L	S	.	.	.	.	.	.
Query Conservation																																																							.	.	.																			.	.	.	.	.	.
Alig confidence																																																							.	.	.																			.	.	.	.	.	.
Template Conservation
Template Sequence		A	Y	D	I	D	R	A	E	I	A	F	L	S	S	I	I	G	K	L	K	T	T	I	K	Y	R	F	L	N	K	E	S	D	V	Y	K	G	T	Y	D	V	V	F	L	L	K	M	L	P	V	L	K	Q	Q	D	V	N	I	L	D	F	L	Q	L	F	H	T	Q	N	F	V	I	S	F	P	I	K	S	L	S
Template Known Secondary structure					S															S			S	S												T	T	S									T								T	T									T
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
				257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.
Predicted Secondary structure		.	.																											.
Query SS confidence		.	.																											.
Query Sequence		.	.	G	I	L	A	S	Q	A	E	S	V	C	E	A	Y	A	D	S	F	A	L	D	P	V	V	E	K	.	E	E	W	C	R	I	T
Query Conservation		.	.																											.
Alig confidence		.	.																											.
Template Conservation
Template Sequence		E	K	G	M	E	E	N	Y	Q	L	W	F	E	S	F	T	K	G	W	I	K	I	L	D	S	K	V	I	G	N	E	L	V	Y	I	T
Template Known Secondary structure			T	T													T	T	T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions