Job Description P0A8T1 Confidence 97.03% Date Thu Jan 5 11:08:40 GMT 2012 Rank 314 Aligned Residues 108 % Identity 20% Template c3evaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rna-directed rna polymerase ns5; PDBTitle: crystal structure of yellow fever virus methyltransferase complexed2 with s-adenosyl-l-homocysteine Resolution 1.50 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																									.													.	.	.	.	.	.																											.	.
Query SS confidence																									.													.	.	.	.	.	.																											.	.
Query Sequence		L	D	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	.	K	L	G	A	A	K	A	I	G	I	D	I	.	.	.	.	.	.	D	P	Q	A	I	Q	A	S	R	D	N	A	E	R	N	G	V	S	D	R	L	E	L	Y	L	P	.	.	K	D	Q	P	E	E	M	K	A	D
Query Conservation																									.													.	.	.	.	.	.																											.	.
Alig confidence																									.													.	.	.	.	.	.					.	.	.	.	.	.	.	.															.	.
Template Conservation																																																.	.	.	.	.	.	.	.
Template Sequence		Y	V	K	L	E	G	R	V	I	D	L	G	C	G	R	G	G	W	C	Y	Y	A	A	A	Q	K	E	V	S	G	V	K	G	F	T	L	G	R	D	G	H	E	K	P	M	N	.	.	.	.	.	.	.	.	V	Q	S	L	G	W	N	I	I	T	F	K	D	K	T	D	I	H	R	L	E	P	V	K	C	D
Template Known Secondary structure		S	S										T		T	T									T	S	T	T												T	T							.	.	.	.	.	.	.	.			B	T	T	G	G	G						S			T	T	S	S						S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.									.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		226	.	.	.	230	.	.	.											.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	V	A	N	I	L	A	.	.	.	.	.	.	.	.	.	.	G	P	L	R	E	L	A	P	L	I	S	V	L	P	V	S	G	G	L	L	G	L	S	G	I	L	A	S	Q	A	E	S	V	C	E	A	Y	A
Query Conservation										.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																											.
Template Sequence		T	L	L	C	D	I	G	E	S	S	S	S	S	V	T	E	G	E	R	T	V	R	V	L	D	T	V	E	K	W	L	A	C	G	V	D	N	F	C	V	K	.	V	L	A	P	Y	M	P	D	V	L	E	K	L	E
Template Known Secondary structure												S																					T	T			S						.		S		T	T	S
Template Predicted Secondary structure																																											.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions