Job Description P0A8T1 Confidence 99.85% Date Thu Jan 5 11:08:40 GMT 2012 Rank 17 Aligned Residues 163 % Identity 20% Template c3dmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable ribosomal rna small subunit methyltransferase; PDBTitle: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex2 with adohcy Resolution 1.55 Å

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		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																		.	.	.	.
Query SS confidence																																		.	.	.	.
Query Sequence		A	V	N	V	M	L	D	P	G	L	A	F	G	T	G	T	H	P	T	T	S	L	C	L	Q	W	L	D	S	L	D	L	.	.	.	.	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	K	L	G	A	A	K	A	I	G	I	D	I	D	P	Q	A	I	Q	A	S	R	D	N	A
Query Conservation																																		.	.	.	.
Alig confidence																																		.	.	.	.																									.
Template Conservation																																																														.
Template Sequence		E	Y	T	F	H	H	L	P	G	V	F	S	A	G	K	V	D	P	A	S	L	L	L	L	E	A	L	Q	E	R	L	G	P	E	G	V	R	G	R	Q	V	L	D	L	G	A	G	Y	G	A	L	T	L	P	L	A	R	M	G	A	.	E	V	V	G	V	E	D	D	L	A	S	V	L	S	L	Q	K	G	L
Template Known Secondary structure									T	T		T	T	T	T	S																		T	T	T	T	T	T							T		T	T	S	T	T							T	T		.							S	B
Template Predicted Secondary structure																																																														.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.									.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																				.															.	.	.	.	.	.	.	.
Query SS confidence																				.															.	.	.	.	.	.	.	.
Query Sequence		E	R	N	G	V	S	D	R	L	E	L	Y	L	P	K	D	Q	P	.	E	E	M	K	A	D	V	V	V	A	N	I	L	A	.	.	.	.	.	.	.	.	G	P	L	R	E	L	A	P	L	I	S	V	L	P	V	S	G	G	L	L	G	L	S	G	I	L	A	S	Q	A	E	S	V	C	E	A	Y	A	D
Query Conservation																				.															.	.	.	.	.	.	.	.
Alig confidence																				.															.	.	.	.	.	.	.	.																																.	.	.
Template Conservation																																																																										.	.	.
Template Sequence		E	A	N	A	L	K	A	Q	A	L	H	S	D	V	D	E	A	L	T	E	E	A	R	F	D	I	I	V	T	N	P	P	F	H	V	G	G	A	V	I	L	D	V	A	Q	A	F	V	N	V	A	A	A	R	L	R	P	G	G	V	F	F	L	V	S	N	P	F	L	K	Y	E	.	.	.	P	L	L	E	E
Template Known Secondary structure				T	T									S	T	T	T	T	S		T	T														T	T		S	S																												T	T	S				.	.	.
Template Predicted Secondary structure																																																																										.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.				.	.	350	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	A	L	D	P	V	V	E	K	E	E	W	C	R	I	T	G	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	F	G	A	F	Q	T	L	K	V	A	E	Y	K	V	L	F	A	E	K
Template Known Secondary structure				S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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