 |
Job Description | P0A8T1 | Confidence | 99.63% | Date | Thu Jan 5 11:08:40 GMT 2012 |
Rank | 140 | Aligned Residues | 121 |
% Identity | 21% | Template | c3ccfB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:cyclopropane-fatty-acyl-phospholipid synthase; |
PDBTitle: crystal structure of putative methyltransferase (yp_321342.1) from2 anabaena variabilis atcc 29413 at 1.90 a resolution
|
Resolution | 1.90 Å |
|
 |
  |   |
145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | S | L | C | L | Q | W | L | D | S | L | D | L | T | G | K | T | V | I | D | F | G | C | G | S | G | I | L | A | I | A | A | L | K | L | G | A | A | K | A | I | G | I | D | I | D | P | Q | A | I | Q | A | S | R | D | N | A | E | R | N | G | V | S | D | R | L | E | L | Y | L | P | K | D | Q | P | E | E | M | K | A |
Query Conservation |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|   |
|   |
|   |
|
|   |   |
|   |   |   |
|   |
|
|
|
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
| . | . |   |   |   |   |
|   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|
|   |   |   | . |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | E | D | L | L | Q | L | L | . |
. |
N | P | Q | P | G | E | F | I | L | D | L | G | C | G | T | G | Q | L | T | E | K | I | A | Q | S | G | . |
A | E | V | L | G | T | D | N | A | A | T | X | I | E | K | A | R | Q | N | Y | P | H | L | H | . |
. |
. |
. |
F | D | V | A | D | A | R | N | F | R | V | D | K | P | L |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  | . | . |
|
|
| T | T |
|  |  |  |  |  | T |
| T | T | S |  |  |  |  |  |  |  |  | T | T | . |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |
| T | T | S |
| . | . | . | . |  |  |  |
|
| T | T | T |
|
|
| S | S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
| . | . |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
27 | . | . | 30 | . | . | . | . | |
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
|
|
|
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
  |
  |   |
225 | . | . | . | . | 230 | . | . | . | . | . | . | |
|
|
. | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | V | V | A | N | I | L | A | G | P | L | . |
. |
. |
R | E | L | A | P | L | I | S | V | L | P | V | S | G | G | L | L | G | L | S | G | I | L | A | S | Q | A | E | S | V | C | E | A | Y | A | D |
Query Conservation |   |
|   |
|
|
|
|
|   |   |   |   |
| . | . | . |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | A | V | F | S | N | A | X | L | H | W | V | K | E | P | E | A | A | I | A | S | I | H | Q | A | L | K | S | G | G | R | F | V | A | E | F | G | G | K | G | N | I | K | Y | I | L | E | A | L | Y | N |
Template Known Secondary structure |   |
 |  |  |  |  |  | S |
| G | G | G |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|