Job Description P0A8T1 Confidence 99.50% Date Thu Jan 5 11:08:40 GMT 2012 Rank 201 Aligned Residues 138 % Identity 22% Template c3c6kC_ PDB info PDB header:transferase Chain: C: PDB Molecule:spermine synthase; PDBTitle: crystal structure of human spermine synthase in complex2 with spermidine and 5-methylthioadenosine Resolution 1.95 Å

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		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.								220	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.														.	.	.	.	.	.	.
Query SS confidence																																																					.	.														.	.	.	.	.	.	.
Query Sequence		D	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	K	L	G	A	A	K	A	I	G	I	D	I	D	P	Q	A	I	Q	A	S	R	D	N	A	E	R	N	G	V	.	.	S	D	R	L	E	L	Y	L	P	K	D	Q	P	.	.	.	.	.	.	.	E	E	M	K	A	D	V
Query Conservation																																																					.	.														.	.	.	.	.	.	.
Alig confidence																																																					.	.														.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Y	T	G	K	D	V	L	I	L	G	G	G	D	G	G	I	L	C	E	I	V	K	L	K	P	K	M	V	T	M	V	E	I	D	Q	M	V	I	D	G	C	K	K	Y	M	R	K	L	D	N	L	K	G	D	C	Y	Q	V	L	I	E	D	C	I	P	V	L	K	R	Y	A	K	E	G	R	E	F	D	Y
Template Known Secondary structure				T	T									T	T									T	T			S							S																	S	S	B		S	S						S												T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.											.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.				.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.									.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																				.	.	.																													.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.																				.	.	.																													.	.	.	.	.	.	.	.
Query Sequence		V	V	A	N	I	L	A	G	P	L	.	.	.	.	.	.	.	.	.	.	R	E	L	A	P	L	I	S	V	L	P	V	S	G	G	L	L	G	L	.	.	.	S	G	I	L	A	S	Q	A	E	S	V	C	E	A	Y	A	D	S	F	A	L	D	P	V	V	E	K	E	.	.	.	.	.	.	.	.	E	W
Query Conservation												.	.	.	.	.	.	.	.	.	.																				.	.	.																													.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.																				.	.	.																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	N	D	L	T	A	V	P	I	S	T	S	P	S	T	W	E	F	L	R	L	I	L	D	L	S	M	K	V	L	K	Q	D	G	K	Y	F	T	Q	G	N	C	V	N	L	T	E	A	L	S	L	Y	E	E	Q	L	G	R	L	Y	C	P	V	E	F	S	K	E	I	V	C	V	P	S	Y	L	E	L	W
Template Known Secondary structure								S	S																						T														T	T													T	S	S	S	S												G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		286	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	R	I	T	G	R	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	F	Y	T	V	W	K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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