Job Description P0A8T1 Confidence 99.84% Date Thu Jan 5 11:08:40 GMT 2012 Rank 19 Aligned Residues 160 % Identity 19% Template c3c0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0064 protein yccw; PDBTitle: crystal structure of a ribosomal rna methyltranferase Resolution 2.00 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	N	A	V	N	V	M	L	D	P	G	L	A	F	G	T	G	T	H	P	T	T	S	L	C	L	Q	W	L	D	S	L	D	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	K	L	G	A	A	K	A	I	G	I	D	I	D	P	Q	A	I	Q	A	S	R	D	N	A	E
Query Conservation
Alig confidence																																				.
Template Conservation																																				.
Template Sequence		E	E	H	G	X	K	L	L	V	D	I	Q	H	G	H	K	T	G	Y	Y	L	D	Q	R	D	S	R	L	A	T	R	R	Y	V	.	E	N	K	R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A	L	X	G	G	C	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E
Template Known Secondary structure				T	T							T	T	T	S	S	T	T	S	S		G	G	G												.	T	T							T		T	T	T									T	T		S							S
Template Predicted Secondary structure																																				.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		203	.	.	.	.		.	.	210	.	.	.	.	.	.	.								.	.	220	.	.	.	.	.	.	.	.	.	230													.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure							.											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	G	V	S	.	D	R	L	E	L	Y	L	P	K	D	.	.	.	.	.	.	.	Q	P	E	E	M	K	A	D	V	V	V	A	N	.	.	.	.	.	.	.	.	.	.	.	.	I	L	A	G	P	L	R	E	L	A	P	L	I	S	V	L	P	V	S	G	G	L	L	G	L	S	G	I	L	A	S	Q
Query Conservation							.											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	K	L	D	L	S	K	A	E	F	V	R	D	D	V	F	K	L	L	R	T	Y	R	D	R	G	E	K	F	D	V	I	V	X	D	P	P	K	F	V	E	N	K	S	Q	L	X	G	A	C	R	G	Y	K	D	I	N	X	L	A	I	Q	L	L	N	E	G	G	I	L	L	T	F	S	C	S	G	L	X
Template Known Secondary structure			T	T			G	G	G						S												T	T											S	S		S	S	T	T		S	S	S				T												T														T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
							263	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure		.	.	.	.	.											.
Query SS confidence		.	.	.	.	.											.
Query Sequence		.	.	.	.	.	A	E	S	V	C	E	A	Y	A	D	.	S	F	A	L	D	P	V	V	E	K	E
Query Conservation		.	.	.	.	.											.
Alig confidence		.	.	.	.	.											.
Template Conservation
Template Sequence		T	S	D	L	F	Q	K	I	I	A	D	A	A	I	D	A	G	R	D	V	Q	F	I	E	Q	F	R
Template Known Secondary structure																		T
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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