Job Description P0A8T1 Confidence 99.56% Date Thu Jan 5 11:08:40 GMT 2012 Rank 180 Aligned Residues 158 % Identity 8% Template c3bt7A_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:trna (uracil-5-)-methyltransferase; PDBTitle: structure of e. coli 5-methyluridine methyltransferase trma2 in complex with 19 nucleotide t-arm analogue Resolution 2.43 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	D	E	N	A	V	N	V	M	L	D	P	G	L	A	F	G	T	G	T	H	P	T	T	S	L	C	L	Q	W	L	D	S	L	D	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	K	L	G	A	A	K	A	I	G	I	D	I	D	P	Q	A	I	Q	A	S	R	D	N
Query Conservation
Alig confidence																																																														.
Template Conservation																																																														.
Template Sequence		P	V	A	G	K	E	M	I	Y	R	Q	V	E	N	S	F	T	Q	P	N	A	A	M	N	I	Q	M	L	E	W	A	L	D	V	T	K	G	S	K	G	D	L	L	E	L	Y	C	G	N	G	N	F	S	L	A	L	A	R	N	F	.	D	R	V	L	A	T	E	I	A	K	P	S	V	A	A	A	Q	Y	N
Template Known Secondary structure			B	T	T	B								T	T	S				S	B															T	T	T			S						S		T	T	S							G	G	G	S	.	S
Template Predicted Secondary structure																																																														.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.																				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	R	N	G	V	S	D	R	L	E	L	Y	L	P	K	D	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	K	A	D	V	V	V	A	N	I	L	A	G	P	L	R	E	L	A	P	L	I	S	V	L	P	V	S	G	G	L	L	G	L	S	G	I	L	A	S
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation										.																																																.	.	.
Template Sequence		I	A	A	N	H	I	D	N	.	V	Q	I	I	R	M	A	A	E	E	F	T	Q	A	M	N	G	V	R	E	F	N	R	L	Q	G	I	D	L	K	S	Y	Q	C	E	T	I	F	V	D	P	P	R	S	G	L	D	.	.	.	S	E	T	E	K	M	V	Q	A	Y	P	R	I	L	Y	I	S	C	N	P	E
Template Known Secondary structure					T	T			S	.								S								S	S					T	T	G	G	G	S		G	G	G												T	T				.	.	.								T	T	S	S							S
Template Predicted Secondary structure										.																																																.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.				.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	E	S	V	C	E	A	Y	A	D	S	F	A	L	D	P	V	V	E	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	C	K	N	L	E	T	L	S	Q	T	H	K	V	E	R	L	A	L	F	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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