Job Description P0A8T1 Confidence 99.39% Date Thu Jan 5 11:08:40 GMT 2012 Rank 222 Aligned Residues 145 % Identity 12% Template c3adnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from e. coli. Resolution 2.90 Å

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																					.																							.	.
Query SS confidence																																					.																							.	.
Query Sequence		T	S	L	C	L	Q	W	L	D	S	L	D	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	K	L	.	G	A	A	K	A	I	G	I	D	I	D	P	Q	A	I	Q	A	S	R	D	N	A	.	.	E	R	N	G	V	S	D	R	L	E	L	Y	L	P	K	D	Q	P	E	E
Query Conservation																																					.																							.	.
Alig confidence																																					.																							.	.
Template Conservation
Template Sequence		H	E	M	M	T	H	V	P	L	L	A	H	G	H	A	K	H	V	L	I	I	G	G	G	D	G	A	M	L	R	E	V	T	R	H	K	N	V	E	S	I	T	M	V	E	I	D	A	G	V	V	S	F	C	R	Q	Y	L	P	N	H	N	A	G	S	Y	D	D	P	R	F	K	L	V	I	V	N	Q	T	S
Template Known Secondary structure													S	S									S			S	S							T	T		T	T									S												S					T	T		T	T		T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.					.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.								.	.	.	.	.	.	.	290
Predicted Secondary structure																																					.	.	.	.																											.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.																											.	.	.	.	.	.	.
Query Sequence		M	K	A	D	V	V	V	A	N	I	L	A	G	P	L	R	E	L	A	P	L	I	S	V	L	P	V	S	G	G	L	L	G	L	S	.	.	.	.	G	I	L	A	S	Q	A	E	S	V	C	E	A	Y	A	D	S	F	A	L	D	P	V	V	E	K	.	.	.	.	.	.	.	E	E	W	C	R	I	T	G
Query Conservation																																					.	.	.	.																											.	.	.	.	.	.	.
Alig confidence															.	.	.	.																			.	.	.	.																											.	.	.	.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		Q	T	F	D	V	I	I	S	D	C	T	S	A	.	.	.	.	F	Y	E	G	C	K	R	C	L	N	P	G	G	I	F	V	A	Q	N	G	V	C	F	L	Q	Q	E	E	A	I	D	S	H	R	K	L	S	H	Y	F	S	D	V	G	F	Y	Q	A	A	I	P	T	Y	Y	G	G	I	M	T	F	A	W	A
Template Known Secondary structure													T	T	.	.	.	.								T															S	S														T	T		S										T	T	S	S	S	S
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		291	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	N
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		237	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions