Job Description P0A8T1 Confidence 99.92% Date Thu Jan 5 11:08:40 GMT 2012 Rank 3 Aligned Residues 273 % Identity 13% Template c2yx1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:hypothetical protein mj0883; PDBTitle: crystal structure of m.jannaschii trna m1g37 methyltransferase Resolution 2.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.							.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.															.	.	.	.	.	.
Query SS confidence																								.	.															.	.	.	.	.	.
Query Sequence		L	K	L	N	T	T	G	A	N	A	E	D	L	S	D	A	L	M	E	A	G	A	.	.	V	S	I	T	F	Q	D	T	H	D	T	P	V	F	.	.	.	.	.	.	E	P	L	P	G	E	T	R	L	W	G	D	T	D	V	I	G	L	F	D	A	E	T	D	M	N	D	V	V	A	I	L	E	N	H	P
Query Conservation																								.	.															.	.	.	.	.	.
Alig confidence																								.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		L	C	L	K	I	N	K	K	H	G	E	Q	T	R	R	I	L	I	E	N	N	L	L	N	K	D	Y	K	I	T	S	E	G	N	Y	L	Y	L	P	I	K	D	V	D	E	D	I	L	K	S	I	L	N	I	E	F	E	L	V	D	K	E	L	E	E	K	P	S	F	R	E	I	I	S	K	K	Y	R	K	E
Template Known Secondary structure								G	G	G											T	T		B		T	T	S						T	T						B		S							T	T	T			S															S								T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		78	.	80	.	.	.									.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.								100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Query Sequence		L	L	G	A	G	F	.	.	.	.	.	.	.	.	A	H	K	I	E	Q	L	E	D	K	D	W	E	R	E	W	.	.	.	.	.	.	.	M	D	N	F	H	P	M	R	F	G	E	R	L	W	I	C	P	S	W	R	D	V	P	D	E	N	A	V	N	V	M	L	D	P	G	L	A	F	G	T	G	T	H
Query Conservation								.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	E	G	L	I	S	L	S	Y	D	V	V	G	D	L	V	I	L	Q	I	S	D	E	V	D	E	K	I	R	K	E	I	G	E	L	A	Y	K	L	I	P	C	K	G	V	F	R	R	K	R	V	R	E	L	E	H	L	A	G	E	N	R	T	L	T	I	H	K	E	N	G	Y	R	L	W	V	D	I	A
Template Known Secondary structure			T	T	S	S	B		S						T	T						B		S		S																S			S																											T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		143	.	.						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.
Query SS confidence					.	.	.	.	.
Query Sequence		P	T	T	.	.	.	.	.	S	L	C	L	Q	W	L	D	S	L	D	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	K	L	G	A	A	K	A	I	G	I	D	I	D	P	Q	A	I	Q	A	S	R	D	N	A	E	R	N	G	V	S	D	R	L	E	L	Y	L	P	K	D
Query Conservation					.	.	.	.	.
Alig confidence					.	.	.	.	.																																		.	.
Template Conservation																																											.	.
Template Sequence		K	V	Y	F	S	P	R	L	G	G	E	R	A	R	I	X	K	K	V	S	L	N	D	V	V	V	D	X	F	A	G	V	G	P	F	S	I	A	C	K	N	.	.	A	K	K	I	Y	A	I	D	I	N	P	H	A	I	E	L	L	K	K	N	I	K	L	N	K	L	E	H	K	I	I	P	I	L	S	D	V
Template Known Secondary structure		T	S				G	G	G													T	T						T	T		T	T	S						T	T	T	.	.	S	S							S															T	T		T	T	T						S		G
Template Predicted Secondary structure																																											.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		Q	P	E	E	M	K	A	D	V	V	V	A	N	I	L	A	G	P	L	R	E	L	A	P	L	I	S	V	L	P	V	S	G	G	L	L	G	L	S	G	I	L	A	S	Q	A	E	S	V	C	E	A	Y	A	D	.	S	F	A	L	D	P	V	V	E
Query Conservation																																																									.
Alig confidence																					.																																				.
Template Conservation																					.
Template Sequence		R	E	V	D	V	K	G	N	R	V	I	X	N	L	P	K	F	A	H	.	K	F	I	D	K	A	L	D	I	V	E	E	G	G	V	I	H	Y	Y	T	I	G	K	D	F	D	K	A	I	K	L	F	E	K	K	C	D	C	E	V	L	E	K	R	I
Template Known Secondary structure		G	G													T	T	T	G	G	.	G	G																					S	S	S											S
Template Predicted Secondary structure																					.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions