Job Description P0A8T1 Confidence 99.59% Date Thu Jan 5 11:08:40 GMT 2012 Rank 166 Aligned Residues 167 % Identity 19% Template c2vs1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine Resolution 2.1 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	R	L	W	I	C	P	S	W	R	D	V	P	D	E	N	A	V	N	V	M	L	D	P	G	L	A	F	G	T	G	T	H	P	T	T	S	L	C	L	Q	W	L	D	S	L	D	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	K	L	G	A	A	K	A	I	G	I	D
Query Conservation
Alig confidence																												.																						.																								.
Template Conservation																												.																						.																								.
Template Sequence		G	D	I	E	R	F	W	G	K	E	F	I	R	E	R	L	D	D	V	D	Y	L	I	H	P	N	.	S	F	F	Q	T	N	S	Y	Q	A	V	N	L	V	R	K	V	S	E	L	V	.	E	G	E	K	I	L	D	M	Y	S	G	V	G	T	F	G	I	Y	L	A	K	R	G	.	F	N	V	K	G	F	D
Template Known Secondary structure											S							T	T							T	T	.	S				S	B																.		S	S						T		T	T	T								T	T	T	.
Template Predicted Secondary structure																												.																						.																								.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		I	D	P	Q	A	I	Q	A	S	R	D	N	A	E	R	N	G	V	S	D	R	L	E	L	Y	L	P	K	D	Q	P	E	E	M	K	A	D	V	V	V	A	N	I	L	A	G	P	L	.	R	E	L	A	P	L	I	S	V	L	P	V	S	G	G	L	L	G	L	S	G	I	L	A	S	Q	A	E	S	V	C
Query Conservation																																																		.
Alig confidence																							.																											.											.
Template Conservation																							.																																						.
Template Sequence		S	N	E	F	A	I	E	M	A	R	R	N	V	E	I	N	N	V	D	A	E	.	F	E	V	A	S	D	R	E	V	S	V	K	G	F	D	T	V	I	V	D	P	P	R	A	G	L	H	P	R	L	V	K	R	L	N	R	E	.	K	P	G	V	I	V	Y	V	S	C	N	P	E	T	F	A	R	D	V	K
Template Known Secondary structure		S															T	T					.						T	T	T				T	T		S								T	T		S												.			S							S
Template Predicted Secondary structure																							.																																						.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	Y	A	D	S	F	A	L	D	P	V	V	E	K	E
Query Conservation
Alig confidence				.	.	.
Template Conservation				.	.	.
Template Sequence		M	L	.	.	.	D	Y	R	I	D	E	I	V	A	L	D
Template Known Secondary structure			T	.	.	.	T
Template Predicted Secondary structure				.	.	.
Template SS confidence
		378	.				380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions