Job Description P0A8T1 Confidence 96.34% Date Thu Jan 5 11:08:40 GMT 2012 Rank 327 Aligned Residues 110 % Identity 14% Template c2px2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:genome polyprotein [contains: capsid protein c PDBTitle: crystal structure of the murray valley encephalitis virus2 ns5 2'-o methyltransferase domain in complex with sah3 (monoclinic form 1) Resolution 2.00 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190							.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.
Predicted Secondary structure																									.														.	.	.	.	.	.																													.
Query SS confidence																									.														.	.	.	.	.	.																													.
Query Sequence		L	D	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	.	K	L	G	A	A	K	A	I	G	I	D	I	D	.	.	.	.	.	.	P	Q	A	I	Q	A	S	R	D	N	A	E	R	N	G	V	S	D	R	L	E	L	Y	L	P	K	D	Q	.	P	E	E	M	K	A	D	V
Query Conservation																									.														.	.	.	.	.	.																													.
Alig confidence																									.														.	.	.	.	.	.				.	.	.	.	.	.	.																			.
Template Conservation																																																.	.	.	.	.	.	.
Template Sequence		F	V	Q	P	I	G	K	V	V	D	L	G	C	G	R	G	G	W	S	Y	Y	A	A	T	M	K	N	V	Q	E	V	R	G	Y	T	K	G	G	P	G	H	E	E	P	M	L	.	.	.	.	.	.	.	M	Q	S	Y	G	W	N	I	V	T	M	K	S	G	V	D	V	F	Y	K	P	S	E	I	S	D	T
Template Known Secondary structure		S											T		T	T	S							T	T	S	T	T											S	T	T	S						.	.	.	.	.	.	.			S	T	T	G	G	G						S			G	G	G	S						S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		227	.	.	230	.	.	.	.	.										.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.																.
Query SS confidence											.	.	.	.	.	.	.	.	.																.
Query Sequence		V	V	A	N	I	L	A	G	P	.	.	.	.	.	.	.	.	.	L	R	E	L	A	P	L	I	S	V	L	P	V	S	G	.	G	L	L	G	L	S	G	I	L	A	S	Q	A	E	S	V	C	E	A	Y	A
Query Conservation											.	.	.	.	.	.	.	.	.																.
Alig confidence											.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		L	L	C	D	I	G	E	S	S	P	S	A	E	I	E	E	Q	R	T	L	R	I	L	E	M	V	S	D	W	L	S	R	G	P	K	E	F	C	I	K	I	L	C	P	Y	M	P	K	V	I	E	K	L	E	S
Template Known Secondary structure											S																					T	T			S							S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions