Job Description P0A8T1 Confidence 86.10% Date Thu Jan 5 11:08:40 GMT 2012 Rank 437 Aligned Residues 112 % Identity 16% Template c1mv8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:gdp-mannose 6-dehydrogenase; PDBTitle: 1.55 a crystal structure of a ternary complex of gdp-mannose2 dehydrogenase from psuedomonas aeruginosa Resolution 1.55 Å

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		160	.	.	.	.	.	.	.	.		.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.												.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure											.				.																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.				.																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	T	V	I	D	F	G	C	G	.	S	G	I	.	L	A	I	A	A	L	K	L	G	A	A	K	A	I	G	I	D	I	D	P	Q	A	I	Q	A	S	R	.	.	.	.	.	.	.	.	.	.	.	D	N	A	E	R	N	G	V	S	D	R	L	E	L	Y	L	P	K	D	Q	P	E	E	M	K	A	D	V
Query Conservation											.				.																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.				.										.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		M	R	I	S	I	F	G	L	G	Y	V	G	A	V	C	A	G	C	L	S	A	R	G	.	H	E	V	I	G	V	D	V	S	S	T	K	I	D	L	I	N	Q	G	K	S	P	I	V	E	P	G	L	E	A	L	L	Q	Q	G	R	Q	T	G	R	L	S	G	T	T	D	F	K	K	A	V	L	D	S	D	V
Template Known Secondary structure										S	T	T											T	T	.								S										T	T			S	S			T	T											T	T						S								T		S
Template Predicted Secondary structure																									.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.											.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.					.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query Sequence		V	V	A	N	I	L	A	.	.	.	.	.	.	.	.	.	.	G	P	L	R	E	L	A	P	L	I	S	V	L	P	V	S	G	G	.	.	.	.	L	L	G	L	S	G	I	L	A	S	Q	A	E	S	V	C	E	A	Y	A	D
Query Conservation									.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation
Template Sequence		S	F	I	C	V	G	T	P	S	K	K	N	G	D	L	D	L	G	Y	I	E	T	V	C	R	E	I	G	F	A	I	R	E	K	S	E	R	H	T	V	V	V	R	S	T	V	L	P	G	T	V	N	N	V	V	I	P	L	I	E
Template Known Secondary structure										B		T	T	S	S	B																	T	T			S								S				T	T					T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions