Return to main results Retrieve Phyre Job Id

Job DescriptionP39342
Confidence94.72%DateThu Jan 5 11:59:31 GMT 2012
Rank265Aligned Residues36
% Identity25%Templatec2z4rB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: crystal structure of domain iii from the thermotoga2 maritima replication initiation protein dnaa
Resolution3.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50 ........
Predicted Secondary structure 









..


Query SS confidence 



























. .







Query Sequence  NRHGLITGATGTGKTVTLQKLAESLSEI. . GVPVFMAD
Query Conservation   

  
 
 





     

  
   ..   




Alig confidence 



























..







Template Conservation     


 

 




 

 


                
Template Sequence  YNPLFIYGGVGLGKTHLLQSIGNYVVQNEPDLRVMYIT
Template Known Secondary structure  S


SSSSSSSSS
Template Predicted Secondary structure 


















Template SS confidence 





































   130.........140.........150.........160.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions