Return to main results Retrieve Phyre Job Id

Job DescriptionP39342
Confidence95.06%DateThu Jan 5 11:59:31 GMT 2012
Rank210Aligned Residues36
% Identity36%Templatec2xzlA_
PDB info PDB header:hydrolase/rnaChain: A: PDB Molecule:atp-dependent helicase nam7; PDBTitle: upf1-rna complex
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50 .........60.
Predicted Secondary structure 






.





Query SS confidence 
























.










Query Sequence  GLITGATGTGKTVTLQKLAESLSEI. GVPVFMADVKG
Query Conservation    
 
 





     

  
   .   







Alig confidence 
























.










Template Conservation 











 

  

  
      



 



Template Sequence  SLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSN
Template Known Secondary structure 
STTSS


SS
Template Predicted Secondary structure 












Template SS confidence 




































   426...430.........440.........450.........460..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions