Return to main results Retrieve Phyre Job Id

Job DescriptionP39342
Confidence94.73%DateThu Jan 5 11:59:31 GMT 2012
Rank262Aligned Residues32
% Identity34%Templatec2j289_
PDB info PDB header:ribosomeChain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs
Resolution8.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50 .......
Predicted Secondary structure 






.


Query SS confidence 
























.






Query Sequence  GLITGATGTGKTVTLQKLAESLSEI. GVPVFMA
Query Conservation    
 
 





     

  
   .   



Alig confidence 
























.






Template Conservation 
 


  
 




 



     
 



 

Template Sequence  VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVV
Template Known Secondary structure 
SSSSSSTTTTSSS



B
Template Predicted Secondary structure 










Template SS confidence 
































   103......110.........120.........130.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions