Return to main results Retrieve Phyre Job Id

Job DescriptionP39342
Confidence93.63%DateThu Jan 5 11:59:31 GMT 2012
Rank406Aligned Residues43
% Identity19%Templatec1hv8B_
PDB info PDB header:rna binding proteinChain: B: PDB Molecule:putative atp-dependent rna helicase mj0669; PDBTitle: crystal structure of a dead box protein from the2 hyperthermophile methanococcus jannaschii
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50 .........60.....
Predicted Secondary structure 









..





Query SS confidence 



























. .














Query Sequence  NRHGLITGATGTGKTVTLQKLAESLSEI. . GVPVFMADVKGDLTG
Query Conservation   

  
 
 





     

  
   ..   









  
Alig confidence 



























..














Template Conservation     


 








   
  
  
        

  
   
  
Template Sequence  EYNIVAQARTGSGKTASFAIPLIELVNENNGIEAIILTPTRELAI
Template Known Secondary structure 
S

SSSSS
SSSS


S
Template Predicted Secondary structure 














Template SS confidence 












































   44.....50.........60.........70.........80........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions