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5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | P | L | L | A | L | R | E | K | I | S | A | L | D | E | K | L | L | A | L | L | A | E | R | R | E | L | A | V | E | V | G | K | A | K | L | L | S | H | R | P | V | R | D | I | D | R | E | R | D | L | L | E | R | L | I | T | L | G | K | A | H | H | L | D | A | H | Y | I | T | R | L | F | Q | L | I | I | E | D | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | P | L | L | A | L | R | E | K | I | S | A | L | D | E | K | L | L | A | L | L | A | E | R | R | E | L | A | V | E | V | G | K | A | K | L | L | S | H | R | P | V | R | D | I | D | R | E | R | D | L | L | E | R | L | I | T | L | G | K | A | H | H | L | D | A | H | Y | I | T | R | L | F | Q | L | I | I | E | D | S |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
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| S |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
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Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
V | L | T | Q | Q | A | L | L | Q | Q | H |
Query Conservation |   |
  |   |   |
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Alig confidence |   |
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Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
V | L | T | Q | Q | A | L | L | Q | Q | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
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Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
85 | . | . | . | . | 90 | . | . | . | . | . |
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