Job Description P0A9J8 Confidence 33.72% Date Thu Jan 5 11:10:31 GMT 2012 Rank 101 Aligned Residues 51 % Identity 16% Template c3r84O_ PDB info PDB header:transcription Chain: O: PDB Molecule:mediator of rna polymerase ii transcription subunit 11; PDBTitle: structure of the mediator head subcomplex med11/22 Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	I	S	A	L	D	E	K	L	L	A	L	L	A	E	R	R	E	L	A	V	E	V	G	K	A	K	L	L	S	H	R	P	V	R	D	I	D	R	E	R	D	L	L	E	R	L	I	T	L	G	K
Query Conservation
Alig confidence																																			.	.
Template Conservation																																			.	.
Template Sequence		K	S	L	N	D	I	E	T	Q	L	C	S	X	L	Q	E	A	S	Q	V	T	F	I	F	G	E	L	K	R	G	N	E	S	.	.	V	K	P	Q	F	E	N	H	V	K	Q	F	Y	E	R	L	D	K
Template Known Secondary structure																														T	T		G	G	.	.	G
Template Predicted Secondary structure																																			.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions