Job Description P0A9J8 Confidence 100.00% Date Thu Jan 5 11:10:31 GMT 2012 Rank 3 Aligned Residues 276 % Identity 23% Template c3luyA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:probable chorismate mutase; PDBTitle: putative chorismate mutase from bifidobacterium adolescentis Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.																																																		.
Query SS confidence																												.	.	.	.																																																		.
Query Sequence		P	H	S	A	R	I	A	F	L	G	P	K	G	S	Y	S	H	L	A	A	R	Q	Y	A	A	R	.	.	.	.	H	F	E	Q	F	I	E	S	G	C	A	K	F	A	D	I	F	N	Q	V	E	T	G	Q	A	D	Y	A	V	V	P	I	E	N	T	S	S	G	A	I	N	D	V	Y	D	L	L	Q	H	.
Query Conservation																												.	.	.	.																																																		.
Alig confidence																												.	.	.	.																									.																									.
Template Conservation																																																								.
Template Sequence		X	S	A	R	K	L	F	Y	L	G	P	Q	G	T	F	T	H	Q	A	A	V	N	A	A	Q	E	L	A	R	F	E	P	Q	G	F	D	L	X	P	X	D	D	V	P	Q	I	L	D	A	A	Q	H	G	D	.	G	W	G	I	V	A	W	E	N	N	V	E	G	Y	V	V	P	N	L	D	A	L	I	D	A
Template Known Secondary structure											S	S	T	T	S													T	G	G	G		T	T								S	S											T	S	.	S									T	T	T												T
Template Predicted Secondary structure																																																								.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	L	S	I	V	G	E	M	T	L	T	I	D	H	C	L	L	V	S	G	T	T	D	L	S	T	I	N	T	V	Y	S	H	P	Q	P	F	Q	Q	C	S	K	F	L	N	R	Y	P	H	W	K	I	E	Y	T	E	S	T	S	A	A	M	E	K	V	A	Q	A	K	S	P	H	V	A	A	L	G	S	E
Query Conservation
Alig confidence																																																		.																		.	.	.	.
Template Conservation																																																		.																		.	.	.	.
Template Sequence		K	D	L	V	G	F	A	R	V	G	V	N	V	E	F	D	A	Y	V	A	Q	G	A	D	P	A	E	A	R	I	A	T	A	H	P	H	G	L	A	Q	C	K	R	F	I	A	E	H	.	R	L	S	T	Q	P	A	T	S	N	A	A	A	C	R	D	L	.	.	.	.	I	P	G	E	I	A	F	G	P	A
Template Known Secondary structure		S	S																			T	T			G	G	G														T							T	.	T							S	S							T		.	.	.	.		T	T							T
Template Predicted Secondary structure																																																		.																		.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.					.	.	.	.	.	150	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.										.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	G	T	L	Y	G	L	Q	V	L	E	R	I	E	A	N	Q	R	Q	N	F	T	R	F	V	V	L	A	R	K	.	.	.	.	.	.	.	.	.	A	I	N	V	S	D	Q	V	P	A	K	T	T	L	L	M	A	T	G	Q	Q	A	G	A	L	V	E	A	L	L	V	L	R	N	H	N	L	I	M	T
Query Conservation																																	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	C	G	E	L	Y	D	I	T	R	I	G	T	A	I	Q	D	Y	Q	G	A	A	T	D	F	L	V	L	S	P	R	A	E	V	A	R	L	L	A	K	P	R	A	E	A	N	V	E	Y	E	S	V	L	T	L	I	P	L	V	T	G	P	G	V	L	A	N	L	L	D	V	F	R	D	A	G	L	N	X	T
Template Known Secondary structure		T					S	S						S	S			S		S																			T						T	T													S			S	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	E	S	R	P	I	H	G	N	P	W	E	E	M	F	Y	L	D	I	Q	A	N	L	E	S	A	E	M	Q	K	A	L	K	E	L	G	E	I	T	R	S	M	K	V	L	G	C	Y	P	S	E	N	V	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	F	I	S	R	P	I	K	G	R	T	G	T	Y	S	F	I	V	T	L	D	A	A	P	W	E	E	R	F	R	D	A	L	V	E	I	A	E	H	G	D	W	A	K	T	L	A	V	Y	P	R	R	E	H	P	N
Template Known Secondary structure									T	T												S	S		T	T	S													T	T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions