Job Description P0A9J8 Confidence 65.99% Date Thu Jan 5 11:10:31 GMT 2012 Rank 77 Aligned Residues 125 % Identity 10% Template c3ix1B_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding PDBTitle: periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding2 protein from bacillus halodurans Resolution 2.40 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	A	R	H	F	E	Q	F	I	E	S	G	C	A	K	F	A	D	I	F	N	Q	V	E	T	G	Q	A	D	Y	A	V	V	P	I	E	N	T	S	S	G	A	I	N	D	V	Y	D	L	L	Q	H	T	S	L	S	I	V	G	E	M	T	L	T	I	D	H	C	L	L	V	S	G	T	T	D	L	S	T
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.
Template Sequence		Y	F	A	E	E	G	L	D	V	D	I	V	F	P	T	N	P	T	D	P	I	Q	L	T	A	S	G	A	I	P	L	A	L	.	.	.	.	.	.	.	S	Y	Q	P	D	V	I	L	A	R	S	K	D	L	P	V	V	S	V	A	S	V	V	R	S	P	L	N	H	V	M	F	L	A	E	Q	D	F	D	S
Template Known Secondary structure						T	T									S	S	T	T								T	T	S		S				.	.	.	.	.	.	.												T	T												S			B						T	T	T			S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.								.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		203						.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure			.	.	.	.	.													.	.									.	.
Query SS confidence			.	.	.	.	.													.	.									.	.
Query Sequence		I	.	.	.	.	.	N	T	V	Y	S	H	P	Q	P	F	Q	Q	.	.	C	S	K	F	L	N	R	Y	.	.	P	H	W	K	I	E	Y	T	E	S	T	S	A	A	M	E	K	V	A	Q	A	K	S	P	H	V	A	A	L	G	S
Query Conservation			.	.	.	.	.													.	.									.	.
Alig confidence			.	.	.	.	.													.	.									.	.
Template Conservation
Template Sequence		P	A	D	L	V	G	L	T	V	G	Y	P	G	I	P	V	N	E	P	I	L	K	T	M	V	E	A	A	G	G	D	Y	E	Q	V	H	L	M	D	V	G	F	E	L	G	A	S	I	V	S	G	R	A	D	A	V	V	G	T	Y	I
Template Known Secondary structure		G	G	G	G	T	T	S						S		T	T												T	T			G	G	G							T	T								T	T	S		S				S		B	T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions