Job Description P0A9J8 Confidence 89.03% Date Thu Jan 5 11:10:31 GMT 2012 Rank 52 Aligned Residues 94 % Identity 11% Template c3ir1F_ PDB info PDB header:protein binding Chain: F: PDB Molecule:outer membrane lipoprotein gna1946; PDBTitle: crystal structure of lipoprotein gna1946 from neisseria2 meningitidis Resolution 2.15 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		H	S	A	R	I	A	F	L	G	P	K	G	S	Y	S	H	L	A	.	.	.	A	R	Q	Y	A	A	R	H	F	E	Q	F	I	E	S	G	C	A	K	F	A	D	I	F	N	Q	V	E	T	G	Q	A	D	Y	A	V	V	P	I	E	N	T	S	S	G	A	I	N	D	V	Y	D	L	L	Q	H	T	S	L
Query Conservation																				.	.	.
Alig confidence										.	.									.	.	.																																					.	.	.	.	.	.	.
Template Conservation										.	.																																																.	.	.	.	.	.	.
Template Sequence		K	E	I	V	F	G	T	T	.	.	V	G	D	F	G	D	M	V	K	E	Q	I	Q	P	E	L	E	K	K	G	Y	T	V	K	L	V	E	F	T	D	Y	V	R	P	N	L	A	L	A	E	G	E	L	D	I	N	V	.	.	.	.	.	.	.	F	Q	H	K	P	Y	L	D	D	F	K	K	E	H	N	L
Template Known Secondary structure										.	.	S	S									T							T	T	T									S	S	S	S									T	S		S				.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.																																																.	.	.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.								.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		179	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		S	I	V	G	E	M	T	L	T	I	D	.	H	C	L	L	V	S	G	T	T	D	L	S	T	I	N
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		D	I	T	E	V	F	Q	V	P	T	A	P	L	G	L	Y	P	G	K	L	K	S	L	E	E	V	K
Template Known Secondary structure											B								S	S	S		S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions