Job Description P0A9J8 Confidence 61.66% Date Thu Jan 5 11:10:31 GMT 2012 Rank 84 Aligned Residues 91 % Identity 11% Template c2v25B_ PDB info PDB header:receptor Chain: B: PDB Molecule:major cell-binding factor; PDBTitle: structure of the campylobacter jejuni antigen peb1a, an2 aspartate and glutamate receptor with bound aspartate Resolution 1.49 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	Y	S	H	L	A	A	R	Q	Y	A	A	R	H	F	E	Q	F	I	E	S	G	C	A	K	F	A	D	I	F	N	Q	V	E	T	G	Q	A	D	Y	A	V	V	P	I	E	N	T	S	S	G	A	I	N	D	V	Y	D	L	L	Q	H	T	S	L	S	I	V	G	E	M	T	L	T	I	D	H	C	L
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.
Template Sequence		A	A	T	T	K	K	A	I	G	E	A	A	K	K	I	G	I	D	V	K	F	S	E	F	P	D	Y	P	S	I	K	A	A	L	D	A	K	R	V	D	A	F	S	V	D	.	.	.	.	.	.	.	.	.	K	S	I	L	L	G	Y	V	D	D	K	S	E	I	L	P	D	S	F	E	P	Q	S	Y	G	I
Template Known Secondary structure		T		S													T									S	S										T	T	S	S	S						.	.	.	.	.	.	.	.	.					T	T	T			T	T					S				S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.										.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	S	G	T	T	D	L	S	T	I	N	T	V	Y	S	H	P	Q	P	F	Q	Q	C	S	K	F	L	N	R	Y
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	K	K	D	D	.	.	.	.	.	.	.	.	.	.	.	P	A	F	A	K	Y	V	D	D	F	V	K	E	H
Template Known Secondary structure					T	T		.	.	.	.	.	.	.	.	.	.	.														T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.												.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions