Job Description P0A9J8 Confidence 84.50% Date Thu Jan 5 11:10:31 GMT 2012 Rank 59 Aligned Residues 76 % Identity 17% Template c2qpqC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:protein bug27; PDBTitle: structure of bug27 from bordetella pertussis Resolution 1.92 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	N	P	H	S	A	R	I	A	F	L	G	P	K	G	S	Y	S	H	L	A	A	R	Q	Y	A	A	R	H	F	E	Q	F	I	E	S	G	C	A	K	F	A	D	I	F	N	Q	V	E	T	G	Q	A	D	Y	A	V	V	P	I	E	N	T	S	S	G	A	I	N	D	V	Y	D	L	L	Q	H	T	S
Query Conservation
Alig confidence																.																																													.	.	.	.	.	.	.	.
Template Conservation																.																																													.	.	.	.	.	.	.	.
Template Sequence		K	Q	T	N	T	Q	V	T	Y	G	S	C	G	N	.	G	T	P	Q	H	L	A	G	E	L	L	N	V	S	A	K	T	H	M	V	H	V	P	Y	K	G	C	G	P	A	L	N	D	V	L	G	S	Q	I	G	L	A	V	V	.	.	.	.	.	.	.	.	T	A	S	S	A	I	P	F	I	K	A	G	K
Template Known Secondary structure			S	S	S								S	S	T	.	T	S														T									S	S										T	T	S	S	S					.	.	.	.	.	.	.	.											T	T	S
Template Predicted Secondary structure																.																																													.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.									.	.	.	.	.	.	.	190	.	.	.	.	.
		178	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	I	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	A	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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