Job Description P0A9J8 Confidence 100.00% Date Thu Jan 5 11:10:31 GMT 2012 Rank 4 Aligned Residues 262 % Identity 25% Template c2qmwA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:prephenate dehydratase; PDBTitle: the crystal structure of the prephenate dehydratase (pdt) from2 staphylococcus aureus subsp. aureus mu50 Resolution 2.30 Å

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	I	A	F	L	G	P	K	G	S	Y	S	H	L	A	A	R	Q	Y	A	A	R	H	F	E	Q	F	I	E	S	G	C	A	K	F	A	D	I	F	N	Q	V	E	T	G	Q	A	D	Y	A	V	V	P	I	E	N	T	S	S	G	A	I	N	D	V	Y	D	L	L	Q	H	T	S	L	S	I	V	G	E
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		X	Q	L	Y	Y	L	G	P	K	G	T	F	S	Y	L	A	C	R	Q	Y	F	S	E	.	.	N	E	A	T	F	Q	P	K	S	N	L	F	E	V	I	K	A	V	A	D	D	D	T	S	I	G	V	V	P	I	E	N	S	I	E	G	T	I	N	I	V	A	D	A	L	A	Q	Q	D	V	F	A	H	G	E
Template Known Secondary structure									S	T	T	S												T	.	.	T	S	S						S	S												S	S									S		S	S	S		S									T	T	S	S
Template Predicted Secondary structure																									.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	L	T	I	D	H	C	L	L	V	S	G	T	T	D	L	S	T	I	N	T	V	Y	S	H	P	Q	P	F	Q	Q	C	S	K	F	L	N	R	Y	P	H	W	K	I	E	Y	T	E	S	T	S	A	A	M	E	K	V	A	Q	A	K	S	P	H	V	A	A	L	G	S	E	A	G	G	T	L	Y	G	L
Query Conservation
Alig confidence																																										.																		.	.	.	.
Template Conservation																																										.																		.	.	.	.
Template Sequence		I	R	L	D	I	N	F	A	L	Y	G	N	G	T	D	S	I	S	D	I	K	K	V	Y	S	I	A	P	A	I	S	Q	T	T	N	Y	I	H	Q	H	.	Q	F	D	Y	D	Y	V	D	S	T	I	Q	S	L	T	K	I	.	.	.	.	E	N	G	V	A	A	I	A	P	L	G	S	G	E	A	Y	G	F
Template Known Secondary structure														S	S			S	T	T														S							T	.	T							S	S							T		.	.	.	.	B	T	T							T	T	T	S	G	G	G	T
Template Predicted Secondary structure																																										.																		.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		Q	V	L	E	R	I	E	A	N	Q	R	Q	N	F	T	R	F	V	V	L	A	R	K	A	I	N	V	S	D	Q	V	P	A	K	T	T	L	L	M	A	T	.	G	Q	Q	A	G	A	L	V	E	A	L	L	V	L	R	N	H	N	L	I	M	T	R	L	E	S	R	P	I	H	G	N	P	W	E	E	M	F
Query Conservation																																											.
Alig confidence																																.	.										.
Template Conservation																																.	.
Template Sequence		T	P	I	D	T	H	I	E	D	Y	P	H	N	V	T	R	F	L	V	I	K	N	Q	Q	Q	F	D	Q	N	A	.	.	T	S	L	X	F	L	I	T	P	X	H	D	K	P	G	L	L	A	S	V	L	N	T	F	A	L	F	N	I	N	L	S	W	I	E	S	R	P	L	K	T	Q	L	G	X	Y	R	F
Template Known Secondary structure										S		S											S						S	S		.	.	S									S	S			T	T											T	T	T												S	S	S	T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	D	I	Q	A	N	L	E	S	A	E	M	Q	K	A	L	K	E	L	G	E	I	T	R	S	M	K	V	L	G	C	Y
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		F	V	Q	A	D	S	A	I	T	T	.	D	I	K	K	V	I	A	I	L	E	T	L	D	F	K	V	E	X	I	G	A	F
Template Known Secondary structure						S			S			.												T	T
Template Predicted Secondary structure												.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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