Job Description P0A9J8 Confidence 38.52% Date Thu Jan 5 11:10:31 GMT 2012 Rank 97 Aligned Residues 169 % Identity 15% Template c2og2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:putative signal recognition particle receptor; PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana Resolution 2.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.									.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.
Query Sequence		P	L	L	A	L	R	E	K	I	S	A	L	D	E	K	L	L	A	L	L	A	E	.	.	.	.	.	.	.	.	R	R	E	L	A	V	E	V	G	K	A	K	L	L	S	H	R	P	V	R	D	I	D	R	E	R	D	L	L	E	R	L	I	T	L	G	K	A	H	H	L	D	A	H	Y	I	T	R	L	F
Query Conservation																								.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.																			.	.	.																								.	.
Template Conservation																																																		.	.	.																								.	.
Template Sequence		D	V	E	K	V	F	S	G	F	S	K	T	R	E	N	L	A	V	I	D	E	L	L	L	F	W	N	L	A	E	T	D	R	V	L	D	E	L	E	E	A	L	L	V	S	D	F	G	.	.	.	P	K	I	T	V	R	I	V	E	R	L	R	E	D	I	M	S	G	K	L	K	S	G	.	.	S	E	I	K
Template Known Secondary structure										T								T							T	T			G	G	G															T	T			.	.	.																	T	T	S			S		.	.
Template Predicted Secondary structure																																																		.	.	.																								.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150
Predicted Secondary structure																																						.	.	.																														.	.	.	.
Query SS confidence																																						.	.	.																														.	.	.	.
Query Sequence		Q	L	I	I	E	D	S	V	L	T	Q	Q	A	L	L	Q	Q	H	L	N	K	I	N	P	H	S	A	R	I	A	F	L	G	P	K	G	.	.	.	S	Y	S	H	L	A	A	R	Q	Y	A	A	R	H	F	E	Q	F	I	E	S	G	C	A	K	F	A	D	I	.	.	.	.	F	N	Q	V	E	T	G	Q
Query Conservation																																						.	.	.																														.	.	.	.
Alig confidence							.	.																														.	.	.																														.	.	.	.							.
Template Conservation							.	.																																																																								.
Template Sequence		D	A	L	K	E	.	.	S	V	L	E	M	L	A	K	K	T	E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	.	R
Template Known Secondary structure							.	.											S					S	S	S	S									T	T	S																T	T											S														.
Template Predicted Secondary structure							.	.																																																																								.
Template SS confidence
		100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		A	D	Y	A	V	V	P	I	E	N	T	S	S	G	A	I	N	D	V	Y	D	L	L	Q	H	.	.	.	.	.	T	S	L	S	I	V	G
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.
Template Conservation
Template Sequence		T	G	C	E	I	V	V	A	E	G	D	K	A	K	A	A	T	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D
Template Known Secondary structure			T							S	S	S	S																	T	T		S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions