Job Description P33913 Confidence 69.25% Date Thu Jan 5 11:52:42 GMT 2012 Rank 47 Aligned Residues 64 % Identity 13% Template c3ombA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:extracellular solute-binding protein, family 1; PDBTitle: crystal structure of extracellular solute-binding protein from2 bifidobacterium longum subsp. infantis Resolution 2.10 Å

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		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.			.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.					.	.	.	.		.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.																													.	.	.	.					.
Query SS confidence																								.	.																													.	.	.	.					.
Query Sequence		A	T	T	G	Q	P	L	S	F	E	L	L	L	P	A	S	S	N	S	Q	W	V	.	.	L	P	F	Q	H	S	L	Q	R	L	G	I	N	M	D	I	R	K	V	D	N	S	Q	I	T	N	R	M	.	.	.	.	R	S	R	D	.	Y	D	M	M	P	R	V	W	R	A
Query Conservation																								.	.																													.	.	.	.					.
Alig confidence																								.	.																													.	.	.	.					.
Template Conservation
Template Sequence		T	A	D	G	K	P	I	V	T	V	L	V	K	K	N	A	N	Q	E	K	X	A	N	X	Q	W	A	K	D	L	E	A	D	C	D	C	K	I	E	W	Q	E	V	T	R	E	A	W	A	Q	Q	K	N	A	T	L	A	S	G	D	I	A	D	V	N	L	N	G	Y	G	A
Template Known Secondary structure			T	T			B										T	T	B			G	G	G												T	S																							T				S				S	S			T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions