Job Description P33913 Confidence 22.37% Date Thu Jan 5 11:52:42 GMT 2012 Rank 124 Aligned Residues 63 % Identity 16% Template c2z8fB_ PDB info PDB header:sugar binding protein Chain: B: PDB Molecule:galacto-n-biose/lacto-n-biose i transporter substrate- PDBTitle: the galacto-n-biose-/lacto-n-biose i-binding protein (gl-bp) of the2 abc transporter from bifidobacterium longum in complex with lacto-n-3 tetraose Resolution 1.65 Å

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		425	.	.	.	.	430	.	.	.	.	.	.	.	.			.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.			.	.	.	460	.	.	.	.	.	.							.	.	.	470	.	.	.	.	.	.	.	.		.	480	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																			.	.											.	.	.	.	.	.													.
Query SS confidence																.	.																			.	.											.	.	.	.	.	.													.
Query Sequence		A	T	T	G	Q	P	L	S	F	E	L	L	L	P	.	.	A	S	S	N	S	Q	W	V	L	P	F	Q	H	S	L	Q	R	L	.	.	G	I	N	M	D	I	R	K	V	D	.	.	.	.	.	.	N	S	Q	I	T	N	R	M	R	S	R	D	.	Y	D	M	M	P	R	V	W	R
Query Conservation																.	.																			.	.											.	.	.	.	.	.													.
Alig confidence																.	.																			.	.											.	.	.	.	.	.													.
Template Conservation
Template Sequence		T	D	D	G	G	V	V	N	I	T	Y	M	H	R	L	P	D	S	E	G	M	T	L	V	N	D	I	V	A	K	W	N	K	Q	H	P	D	I	Q	V	K	A	T	K	F	D	G	K	A	S	D	M	I	K	K	L	E	T	D	V	K	S	G	E	A	P	D	L	A	Q	V	G	Y	A
Template Known Secondary structure						S														T	T	S															T	T									S	S		G	G	G												T				S						T	T
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions