Job Description P33913 Confidence 100.00% Date Thu Jan 5 11:52:42 GMT 2012 Rank 4 Aligned Residues 495 % Identity 20% Template c2wokA_ PDB info PDB header:peptide binding protein/peptide Chain: A: PDB Molecule:clavulanic acid biosynthesis oligopeptide PDBTitle: clavulanic acid biosynthesis oligopeptide2 binding protein 2 complexed with bradykinin Resolution 1.70 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																.																				.	.	.												.
Query SS confidence																																.																				.	.	.												.
Query Sequence		V	N	P	A	A	P	K	G	G	Q	I	T	L	S	A	L	G	T	F	D	N	F	N	R	Y	A	L	R	G	N	.	P	G	A	R	T	E	Q	L	Y	D	T	L	F	T	T	S	D	D	E	.	.	.	P	G	S	Y	Y	P	L	I	A	E	S	.	A	R	Y	A	D	D	Y	S	W	V	E	V	A	I	N
Query Conservation																																.																				.	.	.												.
Alig confidence																																.																				.	.	.												.
Template Conservation
Template Sequence		V	N	P	S	R	R	R	G	G	T	L	R	L	V	S	S	A	D	V	D	S	L	D	P	A	R	T	Y	Y	V	W	V	W	L	L	Q	R	L	L	N	R	T	L	M	A	Y	P	T	D	P	G	P	A	G	L	V	P	A	P	D	L	A	E	G	P	G	E	V	S	D	G	G	R	T	W	T	Y	R	L	R
Template Known Secondary structure		B	S							S							S	S			S		S	S	T	T	S																	S					S		S	S	G	G	G	G	S				S	S	B	S	S	S					G	G	G	T						B
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.																					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	A	R	F	H	D	G	S	P	I	T	A	R	D	V	E	F	T	F	Q	K	F	M	T	E	G	V	P	Q	F	R	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	G	T	T	V	K	A	I	A	P	L	T	V	R	I	E	L	A	K	P	G	K	E	D	M
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	L	R	Y	D	D	G	T	P	I	T	S	D	D	V	R	H	A	V	Q	R	V	F	A	Q	D	V	L	P	G	G	P	T	Y	L	I	P	L	L	D	D	P	E	R	P	Y	P	G	P	Y	R	T	D	E	P	L	R	S	V	L	T	P	D	E	H	T	I	V	F	R	L	T	R	P	F	S	D	F	D
Template Known Secondary structure		S	S		B		T	T	S		B													T	T		T	T	T	S	T	T	S			T							B	T	T	B					T	T	T			S			T	T						T	T							S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		181	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		L	S	L	F	.	.	S	L	P	V	F	P	E	K	Y	W	K	D	H	K	L	S	D	P	L	A	T	P	P	L	A	S	G	P	Y	R	V	T	S	W	K	M	G	Q	N	I	V	Y	S	R	V	K	D	Y	W	A	A	N	L	P	V	N	R	G	R	W	N	F	D	T	I	R	Y	D	Y	Y	L	D	D	N
Query Conservation						.	.
Alig confidence						.	.																			.	.	.	.																																			.	.
Template Conservation																										.	.	.	.																																			.	.
Template Sequence		H	L	M	A	Q	P	C	A	A	P	V	P	R	R	S	D	T	G	A	D	Y	G	R	D	.	.	.	.	P	R	S	S	G	P	Y	R	V	A	R	H	E	P	D	T	L	L	H	L	E	R	N	P	H	W	D	R	A	T	D	P	I	R	.	.	P	A	L	P	D	R	V	E	L	T	I	G	L	D	V	D
Template Known Secondary structure					T	S	G	G	G	S				G	G	G			G	G	G	G	G	G	S	.	.	.	.					S	S								T	T	T								T	T			G	G	G		S	S		.	.					S
Template Predicted Secondary structure																										.	.	.	.																																			.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.					.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	F	E	A	F	K	A	G	A	F	D	L	R	M	E	N	D	A	K	N	W	A	T	R	Y	T	G	K	N	F	D	K	K	Y	I	I	K	D	E	Q	K	N	E	S	A	Q	D	T	R	W	L	A	F	N	I	Q	R	P	V	F	S	D	R	R	V	R	E	A	I	T	L	A	F	D	F	E	W	M	N
Query Conservation
Alig confidence																																			.	.	.
Template Conservation																																			.	.	.
Template Sequence		V	L	D	A	R	L	I	A	G	E	F	D	I	N	L	E	G	R	G	L	Q	H	A	A	Q	R	R	A	T	A	D	E	V	.	.	.	L	R	S	H	T	D	N	P	R	T	S	F	L	H	F	V	A	M	Q	P	H	I	P	P	F	D	N	V	H	V	R	R	A	V	Q	Y	A	A	D	K	I	L	L	Q
Template Known Secondary structure									T	T	S	S	S			S	S																		.	.	.			T	T																T	T	S	T	T	T	T	S
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		339	340	.	.	.	.	.			.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		K	A	L	F	Y	N	A	.	.	W	S	R	T	N	S	Y	F	Q	N	T	E	Y	A	A	R	N	Y	P	D	A	A	E	L	V	L	L	A	P	M	K	K	D	L	P	S	E	V	F	T	Q	I	Y	Q	P	P	V	S	K	G	D	G	Y	D	R	D	N	L	L	K	A	D	K	L	L	N	E	A	G	W	V
Query Conservation									.	.
Alig confidence									.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	R	G	G	P	V	N	G	G	D	L	T	T	A	L	F	P	P	T	L	P	A	H	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	D	L	Y	P	T	G	P	D	L	R	G	D	L	D	A	A	R	A	E	L	A	A	A	G	L	P
Template Known Secondary structure				T	T	T	T	T	S	S					S	S	S	S		T	T	S	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S				T	T	S	S													T	T		T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360																												.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.								.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.																		.
Query SS confidence																																																									.	.	.	.	.	.	.																		.
Query Sequence		L	K	G	Q	Q	R	V	N	A	T	T	G	Q	P	L	S	F	E	L	L	L	P	A	S	S	N	S	Q	W	V	L	P	F	Q	H	S	L	Q	R	L	G	I	N	M	D	I	R	K	V	D	N	S	Q	I	T	.	.	.	.	.	.	.	N	R	M	R	S	R	D	Y	D	M	M	P	R	V	W	R	A	.
Query Conservation																																																									.	.	.	.	.	.	.																		.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.																		.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	.	.	.	.	.	.	.	.	.	.	.	.	F	R	A	V	I	G	T	Q	R	G	K	F	R	L	V	A	D	A	V	V	E	S	L	A	R	V	G	I	E	L	T	V	K	E	L	D	V	A	T	Y	F	S	L	G	A	G	H	P	E	T	V	R	E	H	G	L	G	L	L	V	T	D	W	G	A	D
Template Known Secondary structure		T		.	.	.	.	.	.	.	.	.	.	.	.									T	T															T	T	T										S	T	T						T	T								T	T											S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		389	390													.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.				.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		M	P	W	P	S	S	D	L	Q	I	S	W	S	S	E	Y	I	.	.	.	N	S	T	Y	N	A	P	G	V	Q	S	P	V	I	D	S	L	I	N	Q	I	I	A	A	Q	G	N	K	E	K	L	L	P	L	G	R	A	L	D	R	V	L	T	W	N	Y	Y	M	L	P	M	W	Y	M	A	E	D	R	L	A
Query Conservation																			.	.	.
Alig confidence																			.	.	.																										.																																.
Template Conservation																																															.																																.
Template Sequence		F	P	T	E	Y	G	F	L	A	P	L	V	D	G	R	Q	I	K	R	N	G	G	N	W	N	L	P	E	L	D	D	P	E	V	N	A	L	I	D	E	T	L	H	T	T	.	D	P	A	A	R	A	E	L	W	R	A	V	E	R	R	V	M	E	H	A	V	L	L	P	L	V	H	D	K	T	L	.	H	F
Template Known Secondary structure		S	S	S											G	G	G			T	T	S					T	T																T			.																				T												.
Template Predicted Secondary structure																																															.																																.
Template SS confidence
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.		.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.		.	.
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.		.	.	.	.	.	.	.	590
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		W	W	D	K	F	S	Q	P	A	V	R	P	I	Y	S	L	G	.	I	D	T	W	W	Y	D	V
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		R	N	P	W	V	T	N	V	Y	V	H	P	A	F	G	L	Y	D	I	Q	A	M	G	L	A	E
Template Known Secondary structure				T	T			S	B		B		T	T	T	S	S	B		G	G	G
Template Predicted Secondary structure
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560