Job Description P39386 Confidence 1.14% Date Thu Jan 5 12:00:19 GMT 2012 Rank 57 Aligned Residues 114 % Identity 6% Template c3rkoL_ PDB info PDB header:oxidoreductase Chain: L: PDB Molecule:nadh-quinone oxidoreductase subunit l; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	R	F	F	T	R	H	A	A	T	L	F	F	P	M	A	L	I	L	Y	D	F	A	A	Y	L	S	T	D	L	I	Q	P	G	I	I	N	V	V	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	A	D	V	S	L	A	P	A	A	V	S	L	Y	L	A	G	G	M	A	L
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	G	R	W	S	E	N	V	S	A	I	V	G	V	G	S	V	G	L	A	A	L	V	T	A	F	I	G	V	D	F	F	A	N	G	E	Q	T	Y	S	Q	P	L	W	T	W	M	S	V	G	D	F	N	I	G	F	N	L	V	L	D	G	L	S	L	T	M	L	S	V	V	T	G	V	G	F	L	I	H
Template Known Secondary structure				S		S																														T	T	S														S	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	W	L	L	G	P	L	S	D	R	I	G	R	R	P	V	L	I	T	G	A	L	I	F	T	L	A	C	A	A	T	M	F	T	T	S	M	T	Q	F	L	I	A	R	A	I	Q	G	T	S	I
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		M	Y	A	S	W	Y	M	R	G	E	E	G	Y	S	R	F	F	A	Y	.	T	N	L	F	I	A	S	M	V	V	L	V	L	A	D	N	L	L	L	M	Y	L	G	W	E	G	V	G	L	C	S
Template Known Secondary structure								T	S	S		S									.													T	B	S	B	S
Template Predicted Secondary structure																					.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions