Job Description P39386 Confidence 1.26% Date Thu Jan 5 12:00:19 GMT 2012 Rank 43 Aligned Residues 127 % Identity 9% Template c3lrcC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:arginine/agmatine antiporter; PDBTitle: structure of e. coli adic (p1) Resolution 4.00 Å

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		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	I	V	A	R	F	V	K	D	P	T	E	P	R	F	I	W	R	A	V	P	I	Q	L	V	G	L	S	L	L	I	V	G	N	L	L	S	P	H	V	W	L	W	S	V	L	G	T	S	L	Y	A	F	G	I	G	L	I	F	P	T	L	F	R	F	T	L	F	S	N	K	L	P	K	G	T	V	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	F	P	P	I	F	A	R	V	N	K	A	G	T	P	V	A	G	L	I	I	V	G	I	L	M	T	I	F	Q	L	S	S	I	S	P	N	A	T	K	E	F	G	L	V	S	S	V	S	V	I	F	T	L	V	P	Y	L	Y	T	C	A	A	L	L	L	L	G	H	G	H	F	G	K	A	R	P	A	Y
Template Known Secondary structure		S		S									S	S	S	S																	T	T	S	S	S		S	S	S	S	S			S	S	T	T						T	T													T		T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	N	M	V	I	L	M	V	M	S	V	S	V	E	I	G	R	W	L	W	F	N	G	G	R	L	P	F	H	L	L	A	V	V	A	G	V	I	V	V	F	T	L	A	G	L	L	N	R	V	R	Q	H
Query Conservation
Alig confidence																		.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.
Template Sequence		L	A	V	T	T	I	A	F	L	Y	C	I	W	A	V	V	.	.	.	.	.	.	.	G	S	G	A	K	E	V	M	W	S	F	V	T	L	M	V	I	T	A	M	Y	A	L	N	Y	N	R	L	H	K	N
Template Known Secondary structure																		.	.	.	.	.	.	.	S	S																		T	T	T	S						S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.								.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions