 |
Job Description | P21865 | Confidence | 75.49% | Date | Thu Jan 5 11:38:35 GMT 2012 |
Rank | 280 | Aligned Residues | 114 |
% Identity | 15% | Template | d1z63a1 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| Tandem AAA-ATPase domain
|
Resolution | 3.00 |
|
 |
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
| . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
Query Sequence |   |
R | L | L | E | Q | T | A | A | P | H | R | G | K | L | K | V | F | F | G | A | C | A | G | V | G | K | T | W | A | M | L | A | E | A | Q | R | L | R | A | Q | G | . |
L | D | I | V | V | G | V | V | E | T | H | G | R | K | D | T | A | A | M | L | E | G | L | A | V | L | P | L | K | R | Q | A | Y | R | . |
. |
. |
. |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
| . |   |
|
|
|   |
|   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
| . | . | . |   |
|
|
|
|   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
S | W | X | R | F | X | N | K | L | G | F | G | . |
. |
. |
I | C | L | A | D | D | X | G | L | G | K | T | L | Q | T | I | A | V | F | S | D | A | K | K | E | N | E | L | T | P | S | L | V | I | C | P | L | S | V | L | K | N | W | E | E | E | L | S | K | F | A | P | H | L | R | F | A | V | F | H | E | D | R | S | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
|
| . | . | . |  |  |  |
|
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S | S |  |  |  |  |  |
| S | T | T |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |
| S | S | S | T | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
453 | . | . | . | . | . | . | 460 | . | . | . | . | |
|
|
. | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
87 | . | . | 90 | . | . | |
|
|
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
Predicted Secondary structure |   |
. | . | . | . | . | . |
|  |  |  |  |  | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
G | R | H | I | S | E | . |
. |
. |
. |
F | D | L | D | A | A | L | A | R | R | P | A | L | I | L | M | D | E | L | A | H | S | N | A | P | G | S | R | H | P | K | R | W | Q | D | I | E | E | L |
Query Conservation |   |
. | . | . | . | . | . |   |   |   |   |   |
| . | . | . | . |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   | . | . | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | K | L | E | D | Y | D | I | I | L | T | T | Y | A | V | L | L | R | D | T | R | L | K | E | V | E | W | K | Y | I | V | I | D | E | A | Q | N | I | . |
. |
. |
K | N | P | Q | T | K | I | F | K | A | V | K | E | L |
Template Known Secondary structure |   |
|
| G | G | G | S | S |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  | T |
|
|  |  |  |  |  |  |  | T | G | G | G | G | . | . | . | S |
| T | T | S |  |  |  |  |  |  |  | T | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
| . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | |
|
|
. | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|