Return to main results Retrieve Phyre Job Id

Job DescriptionP21865
Confidence77.30%DateThu Jan 5 11:38:35 GMT 2012
Rank261Aligned Residues110
% Identity17%Templated1szpa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution3.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50... ......60.........70.........80.........90.....
Predicted Secondary structure 











......

















Query SS confidence 































. . . . . .









































Query Sequence  RGKLKVFFGACAGVGKTWAMLAEAQRLRAQGL. . . . . . DIVVGVVETHGRKDTAAMLEGLAVLPLKRQAYRGRHISEFDL
Query Conservation   
 
 
  
   




  

         
 ......


 
  
 
 
  
      
   
            
 
 
Alig confidence 








.





















......









































Template Conservation   
 
  
 
.  
 


 
 
  
               
  
  
                                  
Template Sequence  TGSITELFG. EFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGLDPDDALNNVAYARAYNA
Template Known Secondary structure  SSS.STTSSTTTTTS
TTTT

S
SSS


GGGGT


GGG

ST
Template Predicted Secondary structure 


.





























Template SS confidence 















































































   177..180..... ....190.........200.........210.........220.........230.........240.........250.....
 
   96...100 .........110.........120.........130...
Predicted Secondary structure  ...........


















Query SS confidence 




. . . . . . . . . . .
































Query Sequence  DAALA. . . . . . . . . . . RRPALILMDELAHSNAPGSRHPKRWQDIEELLE
Query Conservation     
 ...........  
   






 
       

  

  

 
Alig confidence 




...........










.




















Template Conservation                       





.  
            
     
Template Sequence  DHQLRLLDAAAQMMSESRFSLIVVDSV. MALYRTDELSARQMHLAKFMR
Template Known Secondary structure  TTTS
TG.GGGGS


T
Template Predicted Secondary structure 





.






Template SS confidence 
















































   256...260.........270.........280.. .......290.........300...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions