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Job DescriptionP21865
Confidence81.26%DateThu Jan 5 11:38:35 GMT 2012
Rank236Aligned Residues218
% Identity16%Templated1qvra3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.........70.........80.........90.......
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Query Sequence  AAPHRGKLKVFFGACAGVGKTWAMLAEAQRLRAQGLDIVVGVVETHGRKDTAAMLEGLAVLPLKRQAYRGRHISEFDLDA
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Template Sequence  KDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMI. . . . . . . . . . . . . . . . . . . . RIDMTEYMEKHAVSRLQLTEA
Template Known Secondary structure  S
SSS
SBS
SSSSSSGGG....................
TTT

SSGGGGG

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   582.......590.........600.........610.........620 .........630.........640.
 
   98.100.........110.........120.........130..... ....140.........150.....
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Query Sequence  ALARRPALILMDELAHSNAPGSRHPKRWQDIEELLEAG. . . . . . . . . . . . . . . . . . . . . . IDVFTTVNVQHLESLNDVVS
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Template Sequence  VRRRPYSVILFDEIEKA. . . . . . HPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIR
Template Known Secondary structure 
SSSSGGGS......
TTT

SSS


TT

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   656...660.........670.. .......680.........690.........700.........710.........720.........
 
   156...160.........170.........180.........190...... ...200.........210.........220.. .....
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Query Sequence  GVTGIQVRETVPDPFFDAADDVVLVDLPPDDLRQRLKEGKV. . YIAGQAERAIEHFFRKGNLIALRELA. . . . . . LRRTA
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Template Sequence  DEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLR
Template Known Secondary structure  TTS
T
SB

B




TTT


BTTTBTST
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   730.........740.........750.........760.........770.........780.........790.........800.........
 
   228.230.........240.........250.........260.
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Query Sequence  DRVDEQMRAWRGHPGEEKVWHTRDAILLCIGHNT
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Template Sequence  RVIQRELETPLAQKILAGEVKEGDRVQVDVGPAG
Template Known Secondary structure  TTSS
SS


TTS
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   810.........820.........830.........840...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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