 |
Job Description | P21865 | Confidence | 62.48% | Date | Thu Jan 5 11:38:35 GMT 2012 |
Rank | 364 | Aligned Residues | 66 |
% Identity | 29% | Template | c3p2yA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:alanine dehydrogenase/pyridine nucleotide transhydrogenase; |
PDBTitle: crystal structure of alanine dehydrogenase/pyridine nucleotide2 transhydrogenase from mycobacterium smegmatis
|
Resolution | 1.82 Å |
|
 |
  |   |
126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | D | I | E | E | L | L | E | A | G | I | D | V | F | T | T | V | N | V | Q | H | L | E | S | L | N | D | V | V | S | G | V | T | G | I | Q | V | R | E | T | V | P | D | P | F | F | D | A | A | D | D | V | V | L | V | D | L | P | P | D | D | L | R | Q | R | L | K | E | G | K | V | Y |
Query Conservation |   |
  |
|
|   |   |
|
|   |   |
|
|   |
|   |
|
|   |
|   |
|
|   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |   |
|   |   |
|   |
|
|   |   |
|
|   |   |   |   |
|   |
|   |
|
|   |   |
|
|
|   |
|   |   |   | . | . | . | . | . | . |   |   |
|
|
|
|
|   |
|
|   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
K | V | V | E | K | L | S | A | R | G | L | E | V | V | V | E | S | A | A | G | A | G | A | L | F | S | D | A | D | Y | E | R | A | G | A | T | I | G | D | P | . |
. |
. |
. |
. |
. |
W | P | A | D | V | V | V | K | V | N | P | P | T | S | D | E | I | S | Q | L | K | P | G | S | V | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
| T | T | T | T | G | G | G | T |
|
|  |  |  |  |  |  | T | T |
|  |  | S |
|
| . | . | . | . | . | . | T | T | S | S |  |  |  |
| S | S |
|
|
|  |  |  |  | T | T | S |
| T | T |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|