Job Description P21865 Confidence 97.32% Date Thu Jan 5 11:38:35 GMT 2012 Rank 64 Aligned Residues 134 % Identity 12% Template c3oovA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein, putative; PDBTitle: crystal structure of a methyl-accepting chemotaxis protein, residues2 122 to 287 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.													.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	M	S	K	A	L	A	V	G	R	S	P	Q	D	I	A	A	T	S	E	Q	F	I	A	S	T	F	H	A	R	S	Q	V	L	L	P	D	D	N	G	K	L	Q	P	L	T	H	P	Q	G	M	T	.	.	.	.	.	.	.	.	.	.	.	.	P	W	D	D	A	I	A	Q	W	S	F	D	K	G	L	P
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	I	S	S	R	I	Q	K	S	I	D	V	D	E	V	L	R	L	C	A	E	G	L	H	D	V	L	G	Y	E	R	V	N	I	L	X	A	D	T	A	R	T	S	L	S	F	V	A	A	V	G	T	A	D	F	N	P	A	G	V	V	L	P	L	D	Q	R	G	G	V	I	T	K	C	F	T	D	R	Q	V
Template Known Secondary structure																											T	T			S									T	T	S	S									S		S	S				T	T					S	S	G	G	G										T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		585																		.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	G	T	D	T	L	P	G	V	P	Y	Q	I	L	P	L	K	S	G	E	K	T	Y	G	L	V	V	V	E	P	G	N	L	R	Q	L	M	I	P	E	Q	Q	R	L	L	E	T	F	T	L	L	V	A	N	A	L	E	R	L	T	L
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	X	I	D	D	V	S	A	Y	P	T	D	F	R	L	Q	S	P	Y	D	A	I	R	A	L	R	S	K	S	F	V	I	C	P	I	V	V	K	G	E	A	I	G	V	F	A	V	D	N	R	S	S	R	R	S	L	N	D	T	D	V	D	T	I	K	L	F	A	D	Q	A	S	S	A	I	V	R	I	N	L
Template Known Secondary structure					S		G	G	G	S		G	G	G	S			T	T	G	G	G		G	G	G			S	S									T	T											T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		648	.	650
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		163	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions