Job Description P21865 Confidence 97.79% Date Thu Jan 5 11:38:35 GMT 2012 Rank 50 Aligned Residues 86 % Identity 21% Template c3na3A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:dna mismatch repair protein mlh1; PDBTitle: mutl protein homolog 1 isoform 1 from homo sapiens Resolution 2.50 Å

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		778	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	R	V	L	I	N	L	L	E	N	A	V	K	Y	A	G	A	Q	A	E	I	G	I	D	A	H	V	E	G	E	N	L	Q	L	D	V	W	D	N	G	P	G	L	P	P	G	Q	E	Q	T	I	F	D	K	F	A	R	G	N	K	E	S	A	V	P	G	V	G	L	G	L	A	I	C	R	A	I	V	D
Query Conservation
Alig confidence																		.	.									.																																		.																		.	.
Template Conservation																		.	.									.																																		.																		.	.
Template Sequence		P	A	N	A	I	K	E	M	I	E	N	C	L	D	A	K	.	.	S	T	S	I	Q	V	I	V	.	K	E	G	G	L	K	L	I	Q	I	Q	D	N	G	T	G	I	R	K	E	D	L	D	I	V	C	E	R	F	T	T	S	K	.	L	Q	S	F	G	F	R	G	E	A	L	A	S	I	S	H	V	.	.
Template Known Secondary structure																T	T	.	.		S							.		G	G	G	T	S								S					G	G	G	G	G	T	T	T	S	T	T			S	S	.							T	T									S	.	.
Template Predicted Secondary structure																		.	.									.																																		.																		.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		858	.	860	.	.	.	.	.	.	.	.	.	870	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	G	G	T	I	T	A	F	N	R	P	E	G	G
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	A	H	V	T	I	T	T	K	T	A	D	G
Template Known Secondary structure		.	.	.	S									T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					111	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions