Return to main results Retrieve Phyre Job Id

Job DescriptionP21865
Confidence61.64%DateThu Jan 5 11:38:35 GMT 2012
Rank372Aligned Residues139
% Identity17%Templatec3n0vD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pp_0327)2 from pseudomonas putida kt2440 at 2.25 a resolution
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   214.....220.........230.........240.........250.........260... ......270.........280.........290..
Predicted Secondary structure 















.








Query SS confidence 

















































.




























Query Sequence  NLIALRELALRRTADRVDEQMRAWRGHPGEEKVWHTRDAILLCIGHNTGS. EKLVRAAARLASRLGSVWHAVYVETPALH
Query Conservation 

  


  
   
  
                        
        .    
   
 
           
      
Alig confidence 






.













........



















.







..
















..
Template Conservation      

 .

  

  
  

 ........
       






  
  
  

    .. 
 
  

  



   ..
Template Sequence  DEAGFRA. GLAERSEAFGXAFE. . . . . . . . LTAPNHRPKVVIXVSKADHCLNDLLYRQR. . IGQLGXDVVAVVSNHPD. .
Template Known Secondary structure 
.GGGT
........
TT


SS

..TTSS

SSST..
Template Predicted Secondary structure 
.

........













..







..
Template SS confidence 















































































   62...... .70.........80.. .......90.........100.........110. ........120........
 
   293......300.........310.........320..... ....330.........340.........350.........360.......
Predicted Secondary structure 







.....




















Query SS confidence 
































. . . . .









































Query Sequence  RLPEKKRRAILSALRLAQELGAETATLSDPAEE. . . . . KAVVRYAREHNLGKIILGRPASRRWWRRETFADRLARIAPDL
Query Conservation                 

  

            .....      
     
    
                
      
Alig confidence  ............




















.....


















.......















Template Conservation  ............    
    

   
      
   
      
     





 .......
  

           
Template Sequence  . . . . . . . . . . . . LEPLAHWHKIPYYHFALDPKDKPGQERKVLQVIEETGAELVILAR. . . . . . . YXQVLSPELCRRLDGW
Template Known Secondary structure  ............TTT




BTTBTT
SSS.......

S


TTTS
Template Predicted Secondary structure  ............












.......





Template SS confidence 















































































   129130.........140.........150.........160.........170... ......180.........
 
   368.370.........380....
Predicted Secondary structure 











Query SS confidence 
















Query Sequence  DQVLVALDEPPARTINN
Query Conservation 

 

            
Alig confidence 
















Template Conservation 









   
   
Template Sequence  AINIHHSLLPGFKGAKP
Template Known Secondary structure 

STT


S
Template Predicted Secondary structure 








Template SS confidence 
















   190.........200......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions