Job Description P21865 Confidence 69.67% Date Thu Jan 5 11:38:35 GMT 2012 Rank 320 Aligned Residues 160 % Identity 15% Template c3mwyW_ PDB info PDB header:hydrolase Chain: W: PDB Molecule:chromo domain-containing protein 1; PDBTitle: crystal structure of the chromodomain-atpase portion of the yeast chd12 chromatin remodeler Resolution 3.70 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.																					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																											.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	F	G	A	C	A	G	V	G	K	T	W	A	M	L	A	E	A	Q	R	L	R	A	Q	.	.	.	.	G	L	D	I	V	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	E	T	H	G	R	K	D	T	A	A	M	L	E	G	L	A	V	L	P	L	K	R
Query Conservation																											.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	L	A	D	E	M	G	L	G	K	T	V	Q	T	V	A	F	I	S	W	L	I	F	A	R	R	Q	N	G	P	H	I	I	V	V	P	L	S	T	M	P	A	W	L	D	T	F	E	K	W	A	P	D	L	N	C	I	C	Y	M	G	N	Q	K	S	R	D	T	I	R	E	Y	E	F	Y	T	N	P	K
Template Known Secondary structure								T	T	S	S	T	T															S			S								T	T	T												S	T	T									S	S											S		S
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																								.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure															.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	Y	R	G	R	H	I	S	E	F	D	L	.	.	.	.	.	D	A	A	L	A	R	R	P	A	L	I	L	M	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	H	S	N	A	P	G	S	R	H	P	K	R	W	Q	D	I	E	E	L	L	E	A
Query Conservation															.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	M	K	F	N	V	L	L	T	T	Y	E	Y	I	L	K	D	R	A	E	L	G	S	I	K	W	Q	F	M	A	V	D	E	A	H	R	L	K	N	A	E	S	S	L	Y	E	S	L	N	S	F	K	V	A	N	R	M	L	I	T	G	T	P	L	Q	N	N	I	K	E	L	A	A	L	V	N	F	L	M	P
Template Known Secondary structure						S						T	T					T						T	S								T	T	G	G	G	G			S	S	S							T	T	S										S				S	S		S												S
Template Predicted Secondary structure
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	D	V	F	T	T	V	N	V	Q	H	L	E	S	L	N	D	V	V	S	G	V	T	G	I	Q	V	R	E	T	V	P	D	P	F	F	D	A	A	D	D	V	V	L	V	D	L	P	P	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	F	N	Q	D	E	E	Q	E	E	Y	I	H	D	L	H	R	R	I	Q	P	F	I	L	R	R	L	K	K	D	V	E	K	S	L	P	S	K	T	E	R	I	L	R	V	E	L	S	D	V	Q
Template Known Secondary structure							T	T												T	T	G	G	G						G	G	G	G	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions