Return to main results Retrieve Phyre Job Id

Job DescriptionP21865
Confidence63.28%DateThu Jan 5 11:38:35 GMT 2012
Rank358Aligned Residues99
% Identity16%Templatec3mwgA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:iron-regulated abc transporter siderophore-binding protein PDBTitle: crystal structure of staphylococcus aureus sira
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70.........80.........90.........100.........110.........120..
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  AEAQRLRAQGLDIVVGVVETHGRKDTAAMLEGLAVLPLKRQAYRGRHISEFDLDAALARRPALILMDELAHSNAPGSRHP
Query Conservation           
 


 
  
 
 
  
      
   
            
 
    
   
   






 
       
Alig confidence 










































......

















............
Template Conservation       
 


   
 
                   
  

   ......  
 
 
  
 




  ............ 
Template Sequence  GATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEP. . . . . . APNLEEISKLKPDLIVAS. . . . . . . . . . . . K
Template Known Secondary structure  TT


S


SSSTTS
TTTGGGGTT

TT......
T

S............
Template Predicted Secondary structure 





















......







............
Template SS confidence 















































































   62.......70.........80.........90.........100.... .....110.........120.. .
 
   123......130.........140.........150.........
Predicted Secondary structure 







Query SS confidence 




































Query Sequence  KRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTG
Query Conservation 

  

  

  

 
 

 
 

 

    
   
 
Alig confidence 




































Template Conservation                              
   
   
Template Sequence  VRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLXGKALG
Template Known Secondary structure  GGGS
SSSS
T
Template Predicted Secondary structure 










Template SS confidence 




































   124.....130.........140.........150.........160
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions