Return to main results Retrieve Phyre Job Id

Job DescriptionP21865
Confidence70.14%DateThu Jan 5 11:38:35 GMT 2012
Rank313Aligned Residues72
% Identity15%Templatec3md9A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:hemin-binding periplasmic protein hmut; PDBTitle: structure of apo form of a periplasmic heme binding protein
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110.........120.........130.........140.........150.........160.........170.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  EFDLDAALARRPALILMDELAHSNAPGSRHPKRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTGIQVRETVPDPFF
Query Conservation 
 
    
   
   






 
       

  

  

  

 
 

 
 

 

    
   
     
 


   
Alig confidence 
















..........




















































Template Conservation      
 
  
 




 ..........            
      
               
  

   
    
    
Template Sequence  TLNAEGILAMKPTMLLV. . . . . . . . . . SELAQPSLVLTQIASSGVNVVTVPGQTTPESVAMKINAVATALHQTEKGQKLI
Template Known Secondary structure  S

TT

S..........TT
S
TT




ST
Template Predicted Secondary structure 






..........















Template SS confidence 















































































   73......80......... 90.........100.........110.........120.........130.........140..
 
   172.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  DA
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  ED
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   143.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions