Job Description P21865 Confidence 96.65% Date Thu Jan 5 11:38:35 GMT 2012 Rank 90 Aligned Residues 118 % Identity 17% Template c3idfA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:usp-like protein; PDBTitle: the crystal structure of a usp-like protein from wolinella2 succinogenes to 2.0a Resolution 2.00 Å

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		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	L	L	C	I	G	H	N	T	G	S	E	K	L	V	R	A	A	A	R	L	A	S	R	L	G	S	V	W	H	A	V	Y	V	E	T	P	A	L	H	R	L	P	E	K	K	R	R	A	I	L	S	A	L	R	L	A	Q	E	L	G	A	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	L	F	A	I	D	D	T	E	A	C	E	R	A	A	Q	Y	I	L	D	M	F	G	K	D	A	D	C	T	L	T	L	I	H	V	K	P	E	F	M	L	Y	G	E	A	V	L	A	A	Y	D	E	I	E	M	K	E	E	E	K	A	K	L	L	T	Q	K	F	S	T	F	F	T	E	K	G	I	N	P
Template Known Secondary structure									S	S															T	T		T	T																																															T	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
			317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure		.																																			.
Query SS confidence		.																																			.
Query Sequence		.	A	T	L	S	D	P	A	E	E	K	A	V	V	R	Y	A	R	E	H	N	L	G	K	I	I	L	G	R	P	A	S	R	R	W	.	W	R	R	E	T	F	A	D	R	L	A	R	I	A	P	D	L	D	Q	V	L	V
Query Conservation		.																																			.
Alig confidence		.																						.	.												.																.
Template Conservation																								.	.																												.
Template Sequence		F	V	V	I	K	E	G	E	P	V	E	M	V	L	E	E	A	K	D	Y	N	L	.	.	L	I	I	G	S	S	E	N	S	F	L	N	K	I	F	A	S	H	Q	D	D	F	I	Q	K	A	P	.	I	P	V	L	I	V
Template Known Secondary structure								S											T	T		S		.	.							T	T	S	T	T	S	S					T	T								S	.	S
Template Predicted Secondary structure																								.	.																												.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions