Job Description P21865 Confidence 97.06% Date Thu Jan 5 11:38:35 GMT 2012 Rank 74 Aligned Residues 154 % Identity 13% Template c3e98B_ PDB info PDB header:unknown function Chain: B: PDB Molecule:gaf domain of unknown function; PDBTitle: crystal structure of a gaf domain containing protein that belongs to2 pfam duf484 family (pa5279) from pseudomonas aeruginosa at 2.43 a3 resolution Resolution 2.43 Å

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		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		I	G	N	L	T	A	G	V	R	Y	Q	A	R	V	A	R	Y	R	E	Q	R	T	R	H	L	Y	E	M	S	K	A	L	A	V	G	R	S	P	Q	D	I	A	A	T	S	E	Q	F	I	A	S	T	F	H	A	R	S	Q	V	L	L	P	D	D	N	G	K	L	Q	P	L	T	H	P	Q	.	.	.	G	M
Query Conservation																																																																													.	.	.
Alig confidence																																																																													.	.	.
Template Conservation
Template Sequence		N	I	E	X	R	H	R	L	S	Q	L	X	D	V	A	R	E	N	D	R	L	F	D	K	T	R	R	L	V	L	D	L	L	D	A	T	S	L	E	D	V	V	S	T	V	E	D	S	L	R	H	E	F	Q	V	P	Y	V	S	L	I	L	F	S	D	S	R	S	V	S	S	A	E	A	H	Q	A	I	G	G
Template Known Secondary structure																																			T			S															T	S			S																							T	T
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	W	D	D	A	I	A	Q	W	S	F	D	K	G	L	P	A	G	A	G	T	D	T	L	P	G	V	P	Y	Q	I	L	P	L	K	S	G	E	K	T	Y	G	L	V	V	V	E	P	G	N	L	R	Q	L	M	I	P	E	Q	Q	R	L	L	E	T	F	T	L	L	V	A	N	A	L	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	S	G	K	T	V	C	G	V	L	R	P	H	E	L	A	F	L	F	G	E	S	D	R	D	E	I	G	S	A	A	V	V	S	L	S	F	Q	G	L	H	G	V	L	A	I	G	S	P	D	P	Q	H	Y	K	S	S	L	G	T	L	F	L	G	Y	V	A	E	V	L	A	R	V	L	P	R
Template Known Secondary structure		S									S																T	T		S									S	S	S										S	S	T	T	T	T	S	S	T	T	T	T														G	G	G
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions