Job Description P21865 Confidence 96.56% Date Thu Jan 5 11:38:35 GMT 2012 Rank 94 Aligned Residues 134 % Identity 13% Template c3dbaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cone cgmp-specific 3',5'-cyclic phosphodiesterase subunit PDBTitle: crystal structure of the cgmp-bound gaf a domain from the2 photoreceptor phosphodiesterase 6c Resolution 2.57 Å

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		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.		.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.																					560	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	T	R	H	L	Y	E	M	S	K	A	L	A	V	G	R	.	S	P	Q	D	I	A	A	T	S	E	Q	F	I	A	S	T	F	H	A	R	S	Q	V	L	L	P	D	D	N	G	K	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	T	H	P	Q	G	M	T
Query Conservation																			.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	C	N	I	L	F	E	L	L	T	E	I	Q	D	E	A	G	S	M	E	K	I	V	H	K	T	L	Q	R	L	S	Q	L	L	A	A	D	R	C	S	M	F	I	C	R	S	R	N	G	I	P	E	V	A	T	R	L	L	N	V	T	P	T	S	K	F	E	D	N	L	V	N	P	D	K	E	T	V	F
Template Known Secondary structure		T												S		S		T	T		T																T												S	S	S	S												T	T							B			G	G	G
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.															.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	W	D	D	A	I	A	Q	W	S	F	D	K	G	L	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	G	T	D	T	L	P	G	V	P	Y	Q	I	L	P	L	K	S	G	E	K	T	Y	G	L	V	V	V	E	P	G	N	L	R	Q	L	M	I	P	E	Q	Q	R	L	L	E	T	F
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	D	I	G	I	A	G	W	V	A	H	T	K	K	F	F	N	I	P	D	V	K	K	N	N	H	F	S	D	Y	L	D	K	K	T	G	Y	T	T	V	N	M	M	A	I	P	I	T	Q	G	K	E	V	L	A	V	V	M	A	L	N	K	L	N	A	S	E	F	S	K	E	D	E	E	V	F	K	K	Y
Template Known Secondary structure			T	T	S	S									T						S	S	T	T	S	S	T	T																								T	T												S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		635	.	.	.	.	640	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	L	V	A	N	A	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	F	I	S	L	V	L	R
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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