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Job DescriptionP21865
Confidence64.76%DateThu Jan 5 11:38:35 GMT 2012
Rank351Aligned Residues160
% Identity18%Templatec3d8bB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:fidgetin-like protein 1; PDBTitle: crystal structure of human fidgetin-like protein 1 in complex with adp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
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Query Sequence  VFFGACAGVGKTWAMLAEAQRLRAQGLDIVVGVVETHGRKDTAAMLEGLAVLPLKRQAYRGRHISEFDLDAALARRPALI
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Template Sequence  ILLFGPPGTGKTLIGKCIASQS. . . GATFFSISASSLTEGEKMVRAL. . . . . . . . . . . . . . . . . . . . . FAVARCQQPAVI
Template Known Secondary structure  SSTTSS...T
GGGG

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S
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   437..440.........450........ .460.........470.........480 .........490..
 
   107..110.........120.........130.........140.........150.........160.........170.........180......
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Query Sequence  LMDELAHSNAPGSRHPKRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTGIQVRETVPDPFFDAADDVVLVDLPPDD
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Template Sequence  FIDEI. . . . . . . . . . . . . . . . . . DSLLSSRRIKTEF. LVQLDGAEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEAS
Template Known Secondary structure  TT..................

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   498.500.. .......510..... ....520.........530.........540.........550........
 
   187..190.........200... ......210.........220.........
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Query Sequence  . . . . LRQRLKEGKVYIAGQAE. . . . RAIEHFFRKGNLIALRELALRRTADR
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Template Sequence  ARKQIVINLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREASLGPIRS
Template Known Secondary structure  TTS
B


TTT

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   572.......580.........590.........600.........610.........620..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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